Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CR1P49238 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.16■□□□□ 0.02
CX3CR1P49238 TOB2P1-201ENST00000469761 992 ntBASIC15.16■□□□□ 0.02
CX3CR1P49238 AC096582.2-201ENST00000510860 516 ntBASIC15.16■□□□□ 0.02
CX3CR1P49238 TPSP2-201ENST00000561760 610 ntBASIC15.16■□□□□ 0.02
CX3CR1P49238 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.16■□□□□ 0.02
CX3CR1P49238 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.16■□□□□ 0.02
CX3CR1P49238 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.16■□□□□ 0.02
CX3CR1P49238 AP002414.4-201ENST00000589764 1148 ntBASIC15.16■□□□□ 0.02
CX3CR1P49238 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
CX3CR1P49238 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CR1P49238 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.16■□□□□ 0.02
CX3CR1P49238 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CR1P49238 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CR1P49238 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.16■□□□□ 0.02
CX3CR1P49238 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CR1P49238 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
CX3CR1P49238 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CR1P49238 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CX3CR1P49238 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CR1P49238 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CR1P49238 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CX3CR1P49238 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CR1P49238 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CR1P49238 AC018695.7-201ENST00000624587 2492 ntBASIC15.16■□□□□ 0.02
CX3CR1P49238 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CR1P49238 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
CX3CR1P49238 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CX3CR1P49238 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.16■□□□□ 0.02
CX3CR1P49238 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.15■□□□□ 0.02
CX3CR1P49238 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CR1P49238 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CR1P49238 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.15■□□□□ 0.02
CX3CR1P49238 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CR1P49238 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CR1P49238 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CX3CR1P49238 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CX3CR1P49238 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.15■□□□□ 0.02
CX3CR1P49238 TP73-AS1-210ENST00000637775 1455 ntBASIC15.15■□□□□ 0.02
CX3CR1P49238 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CR1P49238 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
CX3CR1P49238 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.15■□□□□ 0.02
CX3CR1P49238 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CR1P49238 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
CX3CR1P49238 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CR1P49238 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CR1P49238 KLF4P1-201ENST00000412782 1185 ntBASIC15.15■□□□□ 0.02
CX3CR1P49238 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.15■□□□□ 0.02
CX3CR1P49238 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.15■□□□□ 0.02
CX3CR1P49238 DRAXINP1-201ENST00000437611 948 ntBASIC15.15■□□□□ 0.02
CX3CR1P49238 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.15■□□□□ 0.02
CX3CR1P49238 LINC00265-3P-201ENST00000447588 903 ntBASIC15.15■□□□□ 0.02
CX3CR1P49238 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CR1P49238 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.15■□□□□ 0.02
CX3CR1P49238 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.15■□□□□ 0.02
CX3CR1P49238 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.15■□□□□ 0.02
CX3CR1P49238 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CX3CR1P49238 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CX3CR1P49238 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.15■□□□□ 0.02
CX3CR1P49238 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CR1P49238 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CR1P49238 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CR1P49238 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.15■□□□□ 0.02
CX3CR1P49238 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CR1P49238 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.15■□□□□ 0.02
CX3CR1P49238 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CR1P49238 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CR1P49238 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CR1P49238 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CR1P49238 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.15■□□□□ 0.02
CX3CR1P49238 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CR1P49238 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CX3CR1P49238 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CR1P49238 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CR1P49238 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CR1P49238 AC009336.1-201ENST00000608941 1553 ntBASIC15.15■□□□□ 0.02
CX3CR1P49238 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CR1P49238 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CR1P49238 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CR1P49238 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.15■□□□□ 0.02
CX3CR1P49238 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CR1P49238 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CX3CR1P49238 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.14■□□□□ 0.01
CX3CR1P49238 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.14■□□□□ 0.01
CX3CR1P49238 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CX3CR1P49238 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CX3CR1P49238 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CX3CR1P49238 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CX3CR1P49238 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CX3CR1P49238 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CX3CR1P49238 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CX3CR1P49238 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CX3CR1P49238 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CX3CR1P49238 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CX3CR1P49238 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CX3CR1P49238 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CX3CR1P49238 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CX3CR1P49238 AC003669.1-201ENST00000334569 611 ntBASIC15.14■□□□□ 0.01
CX3CR1P49238 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CX3CR1P49238 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms