Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNGA1P29973 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.56■□□□□ 0.72
CNGA1P29973 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNGA1P29973 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CNGA1P29973 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
CNGA1P29973 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CNGA1P29973 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CNGA1P29973 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.56■□□□□ 0.72
CNGA1P29973 SLC25A6P5-201ENST00000435663 894 ntBASIC19.56■□□□□ 0.72
CNGA1P29973 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.56■□□□□ 0.72
CNGA1P29973 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNGA1P29973 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.56■□□□□ 0.72
CNGA1P29973 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.56■□□□□ 0.72
CNGA1P29973 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.56■□□□□ 0.72
CNGA1P29973 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.56■□□□□ 0.72
CNGA1P29973 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.56■□□□□ 0.72
CNGA1P29973 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.56■□□□□ 0.72
CNGA1P29973 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CNGA1P29973 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CNGA1P29973 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CNGA1P29973 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CNGA1P29973 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CNGA1P29973 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNGA1P29973 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.56■□□□□ 0.72
CNGA1P29973 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CNGA1P29973 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.55■□□□□ 0.72
CNGA1P29973 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.55■□□□□ 0.72
CNGA1P29973 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CNGA1P29973 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.55■□□□□ 0.72
CNGA1P29973 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNGA1P29973 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
CNGA1P29973 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.55■□□□□ 0.72
CNGA1P29973 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNGA1P29973 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNGA1P29973 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CNGA1P29973 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNGA1P29973 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.55■□□□□ 0.72
CNGA1P29973 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CNGA1P29973 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.55■□□□□ 0.72
CNGA1P29973 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.55■□□□□ 0.72
CNGA1P29973 TIMM8BP1-201ENST00000452384 211 ntBASIC19.55■□□□□ 0.72
CNGA1P29973 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CNGA1P29973 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.55■□□□□ 0.72
CNGA1P29973 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.55■□□□□ 0.72
CNGA1P29973 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.55■□□□□ 0.72
CNGA1P29973 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.55■□□□□ 0.72
CNGA1P29973 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNGA1P29973 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNGA1P29973 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.55■□□□□ 0.72
CNGA1P29973 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.55■□□□□ 0.72
CNGA1P29973 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CNGA1P29973 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNGA1P29973 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNGA1P29973 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNGA1P29973 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNGA1P29973 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
CNGA1P29973 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CNGA1P29973 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.55■□□□□ 0.72
CNGA1P29973 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.55■□□□□ 0.72
CNGA1P29973 AC008764.6-201ENST00000595909 2069 ntBASIC19.55■□□□□ 0.72
CNGA1P29973 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CNGA1P29973 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CNGA1P29973 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNGA1P29973 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.54■□□□□ 0.72
CNGA1P29973 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
CNGA1P29973 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.54■□□□□ 0.72
CNGA1P29973 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CNGA1P29973 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
CNGA1P29973 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
CNGA1P29973 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.54■□□□□ 0.72
CNGA1P29973 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNGA1P29973 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNGA1P29973 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNGA1P29973 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.54■□□□□ 0.72
CNGA1P29973 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNGA1P29973 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.54■□□□□ 0.72
CNGA1P29973 AC112191.1-201ENST00000523689 701 ntBASIC19.54■□□□□ 0.72
CNGA1P29973 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CNGA1P29973 AC069262.1-201ENST00000539058 672 ntBASIC19.54■□□□□ 0.72
CNGA1P29973 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.54■□□□□ 0.72
CNGA1P29973 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNGA1P29973 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.54■□□□□ 0.72
CNGA1P29973 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CNGA1P29973 AC090340.1-201ENST00000620778 4980 ntBASIC19.54■□□□□ 0.72
CNGA1P29973 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNGA1P29973 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNGA1P29973 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CNGA1P29973 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CNGA1P29973 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNGA1P29973 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNGA1P29973 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNGA1P29973 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CNGA1P29973 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
CNGA1P29973 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CNGA1P29973 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNGA1P29973 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.53■□□□□ 0.72
CNGA1P29973 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNGA1P29973 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNGA1P29973 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
CNGA1P29973 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms