Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.56■□□□□ 0.4
PTPN3P26045 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.56■□□□□ 0.4
PTPN3P26045 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PTPN3P26045 REXO1L6P-202ENST00000619970 1078 ntBASIC17.56■□□□□ 0.4
PTPN3P26045 AL022326.1-202ENST00000641533 845 ntBASIC17.56■□□□□ 0.4
PTPN3P26045 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN3P26045 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN3P26045 AC011676.5-201ENST00000624864 2660 ntBASIC17.56■□□□□ 0.4
PTPN3P26045 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN3P26045 AL356309.3-201ENST00000624132 1934 ntBASIC17.56■□□□□ 0.4
PTPN3P26045 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN3P26045 AC105020.1-201ENST00000435356 2205 ntBASIC17.56■□□□□ 0.4
PTPN3P26045 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
PTPN3P26045 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN3P26045 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PTPN3P26045 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN3P26045 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN3P26045 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN3P26045 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN3P26045 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN3P26045 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN3P26045 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN3P26045 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN3P26045 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PTPN3P26045 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN3P26045 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN3P26045 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN3P26045 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN3P26045 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.55■□□□□ 0.4
PTPN3P26045 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PTPN3P26045 FGFR3P6-201ENST00000457012 610 ntBASIC17.55■□□□□ 0.4
PTPN3P26045 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.55■□□□□ 0.4
PTPN3P26045 KRT18P56-201ENST00000507275 550 ntBASIC17.55■□□□□ 0.4
PTPN3P26045 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN3P26045 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
PTPN3P26045 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.55■□□□□ 0.4
PTPN3P26045 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.55■□□□□ 0.4
PTPN3P26045 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN3P26045 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN3P26045 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN3P26045 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.55■□□□□ 0.4
PTPN3P26045 AC008608.2-201ENST00000606089 416 ntBASIC17.55■□□□□ 0.4
PTPN3P26045 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.55■□□□□ 0.4
PTPN3P26045 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN3P26045 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN3P26045 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.55■□□□□ 0.4
PTPN3P26045 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
PTPN3P26045 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PTPN3P26045 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PTPN3P26045 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN3P26045 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN3P26045 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN3P26045 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN3P26045 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.55■□□□□ 0.4
PTPN3P26045 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN3P26045 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN3P26045 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN3P26045 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN3P26045 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.54■□□□□ 0.4
PTPN3P26045 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN3P26045 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPN3P26045 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN3P26045 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN3P26045 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN3P26045 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.54■□□□□ 0.4
PTPN3P26045 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN3P26045 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.54■□□□□ 0.4
PTPN3P26045 AC064862.7-201ENST00000604520 867 ntBASIC17.54■□□□□ 0.4
PTPN3P26045 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN3P26045 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN3P26045 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN3P26045 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN3P26045 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN3P26045 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPN3P26045 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPN3P26045 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PTPN3P26045 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
PTPN3P26045 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN3P26045 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN3P26045 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.54■□□□□ 0.4
PTPN3P26045 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PTPN3P26045 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN3P26045 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN3P26045 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN3P26045 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PTPN3P26045 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPN3P26045 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN3P26045 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN3P26045 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN3P26045 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PTPN3P26045 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN3P26045 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN3P26045 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN3P26045 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PTPN3P26045 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN3P26045 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PTPN3P26045 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN3P26045 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN3P26045 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN3P26045 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms