Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH3P22223 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH3P22223 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH3P22223 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CDH3P22223 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH3P22223 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH3P22223 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH3P22223 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
CDH3P22223 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH3P22223 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH3P22223 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CDH3P22223 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH3P22223 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH3P22223 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH3P22223 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH3P22223 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CDH3P22223 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH3P22223 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.93■□□□□ 0.3
CDH3P22223 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CDH3P22223 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CDH3P22223 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
CDH3P22223 AC021087.4-201ENST00000563761 564 ntBASIC16.93■□□□□ 0.3
CDH3P22223 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH3P22223 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.93■□□□□ 0.3
CDH3P22223 AC109462.3-201ENST00000573934 613 ntBASIC16.93■□□□□ 0.3
CDH3P22223 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH3P22223 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH3P22223 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH3P22223 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
CDH3P22223 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CDH3P22223 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH3P22223 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH3P22223 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH3P22223 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.93■□□□□ 0.3
CDH3P22223 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH3P22223 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH3P22223 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH3P22223 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH3P22223 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH3P22223 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH3P22223 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH3P22223 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH3P22223 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH3P22223 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.93■□□□□ 0.3
CDH3P22223 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.93■□□□□ 0.3
CDH3P22223 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH3P22223 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH3P22223 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH3P22223 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH3P22223 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
CDH3P22223 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH3P22223 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH3P22223 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH3P22223 RPS2P28-201ENST00000314255 741 ntBASIC16.92■□□□□ 0.3
CDH3P22223 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH3P22223 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH3P22223 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.92■□□□□ 0.3
CDH3P22223 AC018712.1-201ENST00000455767 687 ntBASIC16.92■□□□□ 0.3
CDH3P22223 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.92■□□□□ 0.3
CDH3P22223 BX005266.1-201ENST00000473402 457 ntBASIC16.92■□□□□ 0.3
CDH3P22223 IGHV3-52-201ENST00000519770 353 ntBASIC16.92■□□□□ 0.3
CDH3P22223 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.92■□□□□ 0.3
CDH3P22223 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.92■□□□□ 0.3
CDH3P22223 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CDH3P22223 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.92■□□□□ 0.3
CDH3P22223 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.92■□□□□ 0.3
CDH3P22223 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH3P22223 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH3P22223 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH3P22223 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH3P22223 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.92■□□□□ 0.3
CDH3P22223 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH3P22223 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
CDH3P22223 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH3P22223 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH3P22223 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CDH3P22223 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
CDH3P22223 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH3P22223 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH3P22223 AC079776.2-201ENST00000641154 1609 ntBASIC16.92■□□□□ 0.3
CDH3P22223 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH3P22223 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH3P22223 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH3P22223 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH3P22223 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH3P22223 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
CDH3P22223 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.91■□□□□ 0.3
CDH3P22223 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.91■□□□□ 0.3
CDH3P22223 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH3P22223 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH3P22223 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.91■□□□□ 0.3
CDH3P22223 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CDH3P22223 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH3P22223 AL049757.1-201ENST00000616842 1596 ntBASIC16.91■□□□□ 0.3
CDH3P22223 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDH3P22223 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH3P22223 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH3P22223 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH3P22223 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH3P22223 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms