Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.09■□□□□ 0.49
PDGFRAP16234 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.09■□□□□ 0.49
PDGFRAP16234 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFRAP16234 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.09■□□□□ 0.49
PDGFRAP16234 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.09■□□□□ 0.49
PDGFRAP16234 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.09■□□□□ 0.49
PDGFRAP16234 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.09■□□□□ 0.49
PDGFRAP16234 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.09■□□□□ 0.49
PDGFRAP16234 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFRAP16234 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFRAP16234 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFRAP16234 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PDGFRAP16234 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFRAP16234 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFRAP16234 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFRAP16234 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFRAP16234 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFRAP16234 EGFEM1P-202ENST00000431685 1563 ntBASIC18.08■□□□□ 0.49
PDGFRAP16234 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PDGFRAP16234 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PDGFRAP16234 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.08■□□□□ 0.49
PDGFRAP16234 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PDGFRAP16234 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDGFRAP16234 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PDGFRAP16234 MRPL3P1-201ENST00000400109 1033 ntBASIC18.08■□□□□ 0.48
PDGFRAP16234 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.08■□□□□ 0.48
PDGFRAP16234 FAM197Y8-203ENST00000450145 560 ntBASIC18.08■□□□□ 0.48
PDGFRAP16234 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.08■□□□□ 0.48
PDGFRAP16234 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.08■□□□□ 0.48
PDGFRAP16234 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDGFRAP16234 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.08■□□□□ 0.48
PDGFRAP16234 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.08■□□□□ 0.48
PDGFRAP16234 AL022326.1-202ENST00000641533 845 ntBASIC18.08■□□□□ 0.48
PDGFRAP16234 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDGFRAP16234 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDGFRAP16234 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDGFRAP16234 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDGFRAP16234 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDGFRAP16234 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.08■□□□□ 0.48
PDGFRAP16234 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PDGFRAP16234 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDGFRAP16234 AC092053.1-201ENST00000605787 1936 ntBASIC18.08■□□□□ 0.48
PDGFRAP16234 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDGFRAP16234 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDGFRAP16234 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.07■□□□□ 0.48
PDGFRAP16234 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PDGFRAP16234 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.07■□□□□ 0.48
PDGFRAP16234 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.07■□□□□ 0.48
PDGFRAP16234 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDGFRAP16234 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDGFRAP16234 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDGFRAP16234 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDGFRAP16234 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PDGFRAP16234 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDGFRAP16234 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.07■□□□□ 0.48
PDGFRAP16234 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PDGFRAP16234 LINC00982-205ENST00000420957 435 ntBASIC18.07■□□□□ 0.48
PDGFRAP16234 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PDGFRAP16234 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
PDGFRAP16234 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.07■□□□□ 0.48
PDGFRAP16234 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDGFRAP16234 SART3-203ENST00000546611 1184 ntBASIC18.07■□□□□ 0.48
PDGFRAP16234 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDGFRAP16234 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.07■□□□□ 0.48
PDGFRAP16234 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PDGFRAP16234 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDGFRAP16234 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDGFRAP16234 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PDGFRAP16234 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PDGFRAP16234 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.07■□□□□ 0.48
PDGFRAP16234 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.07■□□□□ 0.48
PDGFRAP16234 AC022211.2-201ENST00000585075 2527 ntBASIC18.07■□□□□ 0.48
PDGFRAP16234 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PDGFRAP16234 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PDGFRAP16234 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDGFRAP16234 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.07■□□□□ 0.48
PDGFRAP16234 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.06■□□□□ 0.48
PDGFRAP16234 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFRAP16234 AC060834.1-201ENST00000443027 2032 ntBASIC18.06■□□□□ 0.48
PDGFRAP16234 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFRAP16234 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.06■□□□□ 0.48
PDGFRAP16234 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFRAP16234 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PDGFRAP16234 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFRAP16234 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.06■□□□□ 0.48
PDGFRAP16234 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.06■□□□□ 0.48
PDGFRAP16234 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.06■□□□□ 0.48
PDGFRAP16234 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.06■□□□□ 0.48
PDGFRAP16234 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PDGFRAP16234 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.06■□□□□ 0.48
PDGFRAP16234 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.06■□□□□ 0.48
PDGFRAP16234 SLC25A6P4-201ENST00000586535 553 ntBASIC18.06■□□□□ 0.48
PDGFRAP16234 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFRAP16234 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PDGFRAP16234 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFRAP16234 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.06■□□□□ 0.48
PDGFRAP16234 OR6D1P-203ENST00000641209 4860 ntBASIC18.06■□□□□ 0.48
PDGFRAP16234 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PDGFRAP16234 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFRAP16234 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms