Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.33□□□□□ -0.12
CTSDP07339 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSDP07339 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CTSDP07339 AL662844.4-201ENST00000606367 2838 ntBASIC14.33□□□□□ -0.12
CTSDP07339 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSDP07339 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.33□□□□□ -0.12
CTSDP07339 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CTSDP07339 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CTSDP07339 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.33□□□□□ -0.12
CTSDP07339 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
CTSDP07339 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CTSDP07339 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSDP07339 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
CTSDP07339 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
CTSDP07339 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CTSDP07339 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.33□□□□□ -0.12
CTSDP07339 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CTSDP07339 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CTSDP07339 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.32□□□□□ -0.12
CTSDP07339 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.32□□□□□ -0.12
CTSDP07339 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTSDP07339 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.32□□□□□ -0.12
CTSDP07339 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CTSDP07339 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
CTSDP07339 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTSDP07339 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTSDP07339 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTSDP07339 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTSDP07339 AC079328.2-201ENST00000561241 3354 ntBASIC14.32□□□□□ -0.12
CTSDP07339 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTSDP07339 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.32□□□□□ -0.12
CTSDP07339 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTSDP07339 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.32□□□□□ -0.12
CTSDP07339 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.32□□□□□ -0.12
CTSDP07339 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.32□□□□□ -0.12
CTSDP07339 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTSDP07339 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.32□□□□□ -0.12
CTSDP07339 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.32□□□□□ -0.12
CTSDP07339 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTSDP07339 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.32□□□□□ -0.12
CTSDP07339 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.32□□□□□ -0.12
CTSDP07339 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.32□□□□□ -0.12
CTSDP07339 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.32□□□□□ -0.12
CTSDP07339 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.32□□□□□ -0.12
CTSDP07339 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.32□□□□□ -0.12
CTSDP07339 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.32□□□□□ -0.12
CTSDP07339 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CTSDP07339 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
CTSDP07339 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CTSDP07339 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.32□□□□□ -0.12
CTSDP07339 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CTSDP07339 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CTSDP07339 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CTSDP07339 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.32□□□□□ -0.12
CTSDP07339 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTSDP07339 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTSDP07339 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTSDP07339 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CTSDP07339 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTSDP07339 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.32□□□□□ -0.12
CTSDP07339 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CTSDP07339 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTSDP07339 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CTSDP07339 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.32□□□□□ -0.12
CTSDP07339 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CTSDP07339 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.32□□□□□ -0.12
CTSDP07339 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.32□□□□□ -0.12
CTSDP07339 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTSDP07339 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CTSDP07339 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.32□□□□□ -0.12
CTSDP07339 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CTSDP07339 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTSDP07339 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CTSDP07339 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CTSDP07339 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CTSDP07339 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.31□□□□□ -0.12
CTSDP07339 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
CTSDP07339 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CTSDP07339 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CTSDP07339 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.31□□□□□ -0.12
CTSDP07339 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.31□□□□□ -0.12
CTSDP07339 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.31□□□□□ -0.12
CTSDP07339 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.31□□□□□ -0.12
CTSDP07339 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CTSDP07339 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CTSDP07339 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CTSDP07339 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CTSDP07339 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CTSDP07339 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CTSDP07339 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CTSDP07339 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.31□□□□□ -0.12
CTSDP07339 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.31□□□□□ -0.12
CTSDP07339 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CTSDP07339 AC068472.1-201ENST00000474589 881 ntBASIC14.31□□□□□ -0.12
CTSDP07339 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.31□□□□□ -0.12
CTSDP07339 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.31□□□□□ -0.12
CTSDP07339 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CTSDP07339 AC019129.2-201ENST00000609837 1235 ntBASIC14.31□□□□□ -0.12
CTSDP07339 FAM87A-204ENST00000613235 858 ntBASIC14.31□□□□□ -0.12
CTSDP07339 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms