Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.32■□□□□ 0.2
CLPTM1O96005 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.32■□□□□ 0.2
CLPTM1O96005 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.32■□□□□ 0.2
CLPTM1O96005 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.32■□□□□ 0.2
CLPTM1O96005 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLPTM1O96005 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.32■□□□□ 0.2
CLPTM1O96005 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.32■□□□□ 0.2
CLPTM1O96005 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPTM1O96005 AC016396.2-201ENST00000562575 1417 ntBASIC16.32■□□□□ 0.2
CLPTM1O96005 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CLPTM1O96005 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLPTM1O96005 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLPTM1O96005 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CLPTM1O96005 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
CLPTM1O96005 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.32■□□□□ 0.2
CLPTM1O96005 LINC01023-201ENST00000606054 436 ntBASIC16.32■□□□□ 0.2
CLPTM1O96005 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.32■□□□□ 0.2
CLPTM1O96005 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPTM1O96005 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CLPTM1O96005 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPTM1O96005 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CLPTM1O96005 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPTM1O96005 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1O96005 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1O96005 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CLPTM1O96005 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1O96005 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1O96005 AC078925.2-201ENST00000624013 1973 ntBASIC16.31■□□□□ 0.2
CLPTM1O96005 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CLPTM1O96005 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
CLPTM1O96005 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1O96005 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1O96005 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.31■□□□□ 0.2
CLPTM1O96005 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1O96005 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1O96005 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1O96005 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1O96005 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CLPTM1O96005 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1O96005 INGX-201ENST00000359239 846 ntBASIC16.31■□□□□ 0.2
CLPTM1O96005 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.31■□□□□ 0.2
CLPTM1O96005 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1O96005 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.31■□□□□ 0.2
CLPTM1O96005 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1O96005 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.31■□□□□ 0.2
CLPTM1O96005 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1O96005 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1O96005 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.31■□□□□ 0.2
CLPTM1O96005 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.31■□□□□ 0.2
CLPTM1O96005 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1O96005 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1O96005 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1O96005 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1O96005 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1O96005 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CLPTM1O96005 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1O96005 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1O96005 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.31■□□□□ 0.2
CLPTM1O96005 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CLPTM1O96005 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1O96005 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1O96005 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.3■□□□□ 0.2
CLPTM1O96005 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CLPTM1O96005 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.3■□□□□ 0.2
CLPTM1O96005 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.3■□□□□ 0.2
CLPTM1O96005 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.3■□□□□ 0.2
CLPTM1O96005 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLPTM1O96005 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLPTM1O96005 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.3■□□□□ 0.2
CLPTM1O96005 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.3■□□□□ 0.2
CLPTM1O96005 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CLPTM1O96005 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLPTM1O96005 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLPTM1O96005 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CLPTM1O96005 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLPTM1O96005 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLPTM1O96005 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLPTM1O96005 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.3■□□□□ 0.2
CLPTM1O96005 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLPTM1O96005 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.3■□□□□ 0.2
CLPTM1O96005 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.3■□□□□ 0.2
CLPTM1O96005 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.3■□□□□ 0.2
CLPTM1O96005 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLPTM1O96005 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.3■□□□□ 0.2
CLPTM1O96005 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CLPTM1O96005 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.3■□□□□ 0.2
CLPTM1O96005 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CLPTM1O96005 AC145285.6-201ENST00000604632 637 ntBASIC16.3■□□□□ 0.2
CLPTM1O96005 AC012306.2-201ENST00000609350 630 ntBASIC16.3■□□□□ 0.2
CLPTM1O96005 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLPTM1O96005 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLPTM1O96005 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
CLPTM1O96005 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CLPTM1O96005 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.3■□□□□ 0.2
CLPTM1O96005 AC126177.1-201ENST00000547829 2218 ntBASIC16.3■□□□□ 0.2
CLPTM1O96005 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.3■□□□□ 0.2
CLPTM1O96005 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLPTM1O96005 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.3■□□□□ 0.2
CLPTM1O96005 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLPTM1O96005 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms