Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM3O75382 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM3O75382 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM3O75382 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM3O75382 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM3O75382 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM3O75382 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM3O75382 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM3O75382 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRIM3O75382 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM3O75382 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRIM3O75382 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM3O75382 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TRIM3O75382 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM3O75382 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM3O75382 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM3O75382 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM3O75382 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM3O75382 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM3O75382 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM3O75382 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM3O75382 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM3O75382 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM3O75382 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM3O75382 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM3O75382 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM3O75382 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM3O75382 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM3O75382 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRIM3O75382 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.11■□□□□ 0.17
TRIM3O75382 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM3O75382 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
TRIM3O75382 AC009078.2-202ENST00000463353 338 ntBASIC16.11■□□□□ 0.17
TRIM3O75382 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.11■□□□□ 0.17
TRIM3O75382 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.11■□□□□ 0.17
TRIM3O75382 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.11■□□□□ 0.17
TRIM3O75382 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM3O75382 AD001527.2-201ENST00000622994 785 ntBASIC16.11■□□□□ 0.17
TRIM3O75382 TP73-AS1-207ENST00000624167 988 ntBASIC16.11■□□□□ 0.17
TRIM3O75382 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM3O75382 AL513477.1-201ENST00000602865 2407 ntBASIC16.11■□□□□ 0.17
TRIM3O75382 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM3O75382 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM3O75382 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM3O75382 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM3O75382 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRIM3O75382 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM3O75382 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM3O75382 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM3O75382 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM3O75382 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM3O75382 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TRIM3O75382 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM3O75382 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM3O75382 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM3O75382 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM3O75382 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRIM3O75382 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TRIM3O75382 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM3O75382 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRIM3O75382 BX276092.7-203ENST00000637198 1536 ntBASIC16.1■□□□□ 0.17
TRIM3O75382 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM3O75382 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM3O75382 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM3O75382 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM3O75382 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM3O75382 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM3O75382 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM3O75382 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
TRIM3O75382 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM3O75382 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM3O75382 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.1■□□□□ 0.17
TRIM3O75382 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM3O75382 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.1■□□□□ 0.17
TRIM3O75382 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM3O75382 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM3O75382 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TRIM3O75382 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM3O75382 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM3O75382 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM3O75382 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM3O75382 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM3O75382 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM3O75382 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.1■□□□□ 0.17
TRIM3O75382 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM3O75382 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM3O75382 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM3O75382 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM3O75382 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM3O75382 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM3O75382 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM3O75382 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM3O75382 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM3O75382 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRIM3O75382 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM3O75382 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM3O75382 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM3O75382 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM3O75382 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM3O75382 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms