Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.77■□□□□ 0.28
CNOT3O75175 AL096828.2-201ENST00000567259 1965 ntBASIC16.77■□□□□ 0.28
CNOT3O75175 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT3O75175 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT3O75175 NKILA-202ENST00000614771 2598 ntBASIC16.77■□□□□ 0.28
CNOT3O75175 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT3O75175 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT3O75175 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT3O75175 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT3O75175 KRT18P67-201ENST00000432816 1264 ntBASIC16.77■□□□□ 0.28
CNOT3O75175 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CNOT3O75175 AC007967.3-201ENST00000434308 558 ntBASIC16.77■□□□□ 0.28
CNOT3O75175 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.77■□□□□ 0.28
CNOT3O75175 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CNOT3O75175 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT3O75175 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT3O75175 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT3O75175 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
CNOT3O75175 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.77■□□□□ 0.27
CNOT3O75175 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CNOT3O75175 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.77■□□□□ 0.27
CNOT3O75175 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
CNOT3O75175 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
CNOT3O75175 AC103702.1-201ENST00000548801 2630 ntBASIC16.77■□□□□ 0.27
CNOT3O75175 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CNOT3O75175 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CNOT3O75175 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CNOT3O75175 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CNOT3O75175 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CNOT3O75175 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT3O75175 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT3O75175 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT3O75175 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT3O75175 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT3O75175 FLJ13224-201ENST00000313737 1514 ntBASIC16.76■□□□□ 0.27
CNOT3O75175 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT3O75175 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.76■□□□□ 0.27
CNOT3O75175 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.76■□□□□ 0.27
CNOT3O75175 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT3O75175 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.76■□□□□ 0.27
CNOT3O75175 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT3O75175 AL022342.1-201ENST00000400363 863 ntBASIC16.76■□□□□ 0.27
CNOT3O75175 RBM17P3-201ENST00000417687 1192 ntBASIC16.76■□□□□ 0.27
CNOT3O75175 ABCD1P5-201ENST00000445663 754 ntBASIC16.76■□□□□ 0.27
CNOT3O75175 AC018712.1-201ENST00000455767 687 ntBASIC16.76■□□□□ 0.27
CNOT3O75175 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.76■□□□□ 0.27
CNOT3O75175 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.76■□□□□ 0.27
CNOT3O75175 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.76■□□□□ 0.27
CNOT3O75175 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CNOT3O75175 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.76■□□□□ 0.27
CNOT3O75175 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.76■□□□□ 0.27
CNOT3O75175 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT3O75175 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CNOT3O75175 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT3O75175 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.76■□□□□ 0.27
CNOT3O75175 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT3O75175 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT3O75175 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT3O75175 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.76■□□□□ 0.27
CNOT3O75175 AP005117.1-201ENST00000584346 1413 ntBASIC16.76■□□□□ 0.27
CNOT3O75175 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT3O75175 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.76■□□□□ 0.27
CNOT3O75175 AC010460.3-201ENST00000511359 1579 ntBASIC16.76■□□□□ 0.27
CNOT3O75175 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT3O75175 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT3O75175 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT3O75175 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT3O75175 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT3O75175 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.76■□□□□ 0.27
CNOT3O75175 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CNOT3O75175 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT3O75175 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT3O75175 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT3O75175 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.76■□□□□ 0.27
CNOT3O75175 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT3O75175 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CNOT3O75175 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT3O75175 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT3O75175 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT3O75175 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT3O75175 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT3O75175 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT3O75175 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT3O75175 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CNOT3O75175 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CNOT3O75175 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.75■□□□□ 0.27
CNOT3O75175 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT3O75175 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT3O75175 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.75■□□□□ 0.27
CNOT3O75175 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CNOT3O75175 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.75■□□□□ 0.27
CNOT3O75175 DUTP2-201ENST00000519164 463 ntBASIC16.75■□□□□ 0.27
CNOT3O75175 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.75■□□□□ 0.27
CNOT3O75175 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT3O75175 AL049840.3-201ENST00000602669 611 ntBASIC16.75■□□□□ 0.27
CNOT3O75175 AL773604.1-201ENST00000617417 272 ntBASIC16.75■□□□□ 0.27
CNOT3O75175 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT3O75175 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.75■□□□□ 0.27
CNOT3O75175 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT3O75175 AC011676.5-201ENST00000624864 2660 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms