Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 AC021087.4-201ENST00000563761 564 ntBASIC16.63■□□□□ 0.25
SLC28A2O43868 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SLC28A2O43868 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC28A2O43868 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SLC28A2O43868 AC106028.4-201ENST00000614509 607 ntBASIC16.63■□□□□ 0.25
SLC28A2O43868 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.63■□□□□ 0.25
SLC28A2O43868 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC28A2O43868 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SLC28A2O43868 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC28A2O43868 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC28A2O43868 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC28A2O43868 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC28A2O43868 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC28A2O43868 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SLC28A2O43868 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC28A2O43868 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
SLC28A2O43868 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC28A2O43868 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC28A2O43868 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC28A2O43868 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC28A2O43868 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC28A2O43868 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SLC28A2O43868 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SLC28A2O43868 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC28A2O43868 AC012313.1-201ENST00000593393 3059 ntBASIC16.62■□□□□ 0.25
SLC28A2O43868 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC28A2O43868 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC28A2O43868 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SLC28A2O43868 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC28A2O43868 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC28A2O43868 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC28A2O43868 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC28A2O43868 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC28A2O43868 RCN1P2-201ENST00000398357 915 ntBASIC16.62■□□□□ 0.25
SLC28A2O43868 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC28A2O43868 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.62■□□□□ 0.25
SLC28A2O43868 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.62■□□□□ 0.25
SLC28A2O43868 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC28A2O43868 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC28A2O43868 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC28A2O43868 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC28A2O43868 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC28A2O43868 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC28A2O43868 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC28A2O43868 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC28A2O43868 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC28A2O43868 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC28A2O43868 LINC00304-203ENST00000565008 1864 ntBASIC16.62■□□□□ 0.25
SLC28A2O43868 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC28A2O43868 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SLC28A2O43868 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC28A2O43868 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC28A2O43868 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC28A2O43868 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC28A2O43868 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC28A2O43868 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC28A2O43868 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC28A2O43868 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SLC28A2O43868 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC28A2O43868 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC28A2O43868 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC28A2O43868 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC28A2O43868 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC28A2O43868 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC28A2O43868 AL138688.1-201ENST00000624851 1594 ntBASIC16.61■□□□□ 0.25
SLC28A2O43868 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC28A2O43868 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC28A2O43868 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC28A2O43868 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC28A2O43868 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SLC28A2O43868 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SLC28A2O43868 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.61■□□□□ 0.25
SLC28A2O43868 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.61■□□□□ 0.25
SLC28A2O43868 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SLC28A2O43868 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC28A2O43868 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC28A2O43868 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.61■□□□□ 0.25
SLC28A2O43868 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.61■□□□□ 0.25
SLC28A2O43868 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC28A2O43868 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SLC28A2O43868 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SLC28A2O43868 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC28A2O43868 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SLC28A2O43868 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
SLC28A2O43868 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC28A2O43868 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC28A2O43868 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC28A2O43868 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC28A2O43868 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SLC28A2O43868 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC28A2O43868 KRT8P47-201ENST00000604727 1398 ntBASIC16.61■□□□□ 0.25
SLC28A2O43868 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC28A2O43868 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC28A2O43868 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC28A2O43868 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC28A2O43868 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC28A2O43868 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC28A2O43868 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SLC28A2O43868 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
SLC28A2O43868 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms