Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC18.39■□□□□ 0.53
TNRC18O15417 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
TNRC18O15417 AC073389.1-201ENST00000595595 795 ntBASIC18.39■□□□□ 0.53
TNRC18O15417 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.39■□□□□ 0.53
TNRC18O15417 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.39■□□□□ 0.53
TNRC18O15417 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TNRC18O15417 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNRC18O15417 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TNRC18O15417 AC138028.6-201ENST00000616106 1482 ntBASIC18.39■□□□□ 0.53
TNRC18O15417 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNRC18O15417 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TNRC18O15417 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.39■□□□□ 0.53
TNRC18O15417 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TNRC18O15417 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC18.39■□□□□ 0.53
TNRC18O15417 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC18.39■□□□□ 0.53
TNRC18O15417 MIR4750-201ENST00000584564 56 ntBASIC18.39■□□□□ 0.53
TNRC18O15417 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNRC18O15417 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNRC18O15417 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNRC18O15417 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNRC18O15417 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.38■□□□□ 0.53
TNRC18O15417 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNRC18O15417 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNRC18O15417 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TNRC18O15417 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TNRC18O15417 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC18.38■□□□□ 0.53
TNRC18O15417 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNRC18O15417 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNRC18O15417 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TNRC18O15417 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNRC18O15417 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.38■□□□□ 0.53
TNRC18O15417 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TNRC18O15417 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
TNRC18O15417 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
TNRC18O15417 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.38■□□□□ 0.53
TNRC18O15417 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.38■□□□□ 0.53
TNRC18O15417 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.38■□□□□ 0.53
TNRC18O15417 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC18.38■□□□□ 0.53
TNRC18O15417 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.38■□□□□ 0.53
TNRC18O15417 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.38■□□□□ 0.53
TNRC18O15417 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNRC18O15417 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNRC18O15417 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TNRC18O15417 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.37■□□□□ 0.53
TNRC18O15417 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNRC18O15417 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNRC18O15417 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNRC18O15417 AL589987.1-201ENST00000453380 819 ntBASIC18.37■□□□□ 0.53
TNRC18O15417 AC008267.1-201ENST00000474858 1069 ntBASIC18.37■□□□□ 0.53
TNRC18O15417 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC18.37■□□□□ 0.53
TNRC18O15417 KC6-205ENST00000599934 556 ntTSL 4 BASIC18.37■□□□□ 0.53
TNRC18O15417 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.37■□□□□ 0.53
TNRC18O15417 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TNRC18O15417 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNRC18O15417 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNRC18O15417 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TNRC18O15417 AL135999.2-201ENST00000622438 1686 ntBASIC18.37■□□□□ 0.53
TNRC18O15417 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNRC18O15417 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNRC18O15417 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC18.37■□□□□ 0.53
TNRC18O15417 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.37■□□□□ 0.53
TNRC18O15417 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TNRC18O15417 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.37■□□□□ 0.53
TNRC18O15417 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.37■□□□□ 0.53
TNRC18O15417 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TNRC18O15417 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TNRC18O15417 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.37■□□□□ 0.53
TNRC18O15417 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNRC18O15417 NOC2LP1-202ENST00000452600 2235 ntBASIC18.36■□□□□ 0.53
TNRC18O15417 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC18.36■□□□□ 0.53
TNRC18O15417 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC18.36■□□□□ 0.53
TNRC18O15417 IMP3P2-201ENST00000489760 475 ntBASIC18.36■□□□□ 0.53
TNRC18O15417 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
TNRC18O15417 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC18.36■□□□□ 0.53
TNRC18O15417 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC18.36■□□□□ 0.53
TNRC18O15417 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TNRC18O15417 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TNRC18O15417 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TNRC18O15417 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC18.36■□□□□ 0.53
TNRC18O15417 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC18.36■□□□□ 0.53
TNRC18O15417 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TNRC18O15417 EGFEM1P-202ENST00000431685 1563 ntBASIC18.36■□□□□ 0.53
TNRC18O15417 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TNRC18O15417 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNRC18O15417 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.36■□□□□ 0.53
TNRC18O15417 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.36■□□□□ 0.53
TNRC18O15417 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNRC18O15417 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC18.36■□□□□ 0.53
TNRC18O15417 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.36■□□□□ 0.53
TNRC18O15417 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.36■□□□□ 0.53
TNRC18O15417 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNRC18O15417 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.36■□□□□ 0.53
TNRC18O15417 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNRC18O15417 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNRC18O15417 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNRC18O15417 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.36■□□□□ 0.53
TNRC18O15417 BCRP2-202ENST00000447763 634 ntBASIC18.36■□□□□ 0.53
TNRC18O15417 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC18.36■□□□□ 0.53
TNRC18O15417 BCRP6-201ENST00000510112 632 ntBASIC18.36■□□□□ 0.53
TNRC18O15417 BCRP7-201ENST00000511549 544 ntBASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms