Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.77■□□□□ 0.76
TMEM88BA6NKF7 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC19.77■□□□□ 0.76
TMEM88BA6NKF7 AC244093.1-201ENST00000610837 814 ntBASIC19.77■□□□□ 0.76
TMEM88BA6NKF7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.77■□□□□ 0.76
TMEM88BA6NKF7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM88BA6NKF7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM88BA6NKF7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM88BA6NKF7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.77■□□□□ 0.76
TMEM88BA6NKF7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TMEM88BA6NKF7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TMEM88BA6NKF7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
TMEM88BA6NKF7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.77■□□□□ 0.75
TMEM88BA6NKF7 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TMEM88BA6NKF7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.76■□□□□ 0.75
TMEM88BA6NKF7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM88BA6NKF7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM88BA6NKF7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.76■□□□□ 0.75
TMEM88BA6NKF7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM88BA6NKF7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM88BA6NKF7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM88BA6NKF7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TMEM88BA6NKF7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC19.76■□□□□ 0.75
TMEM88BA6NKF7 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM88BA6NKF7 ANKRD19P-201ENST00000338192 862 ntBASIC19.76■□□□□ 0.75
TMEM88BA6NKF7 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM88BA6NKF7 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC19.76■□□□□ 0.75
TMEM88BA6NKF7 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC19.76■□□□□ 0.75
TMEM88BA6NKF7 MYCLP2-201ENST00000449268 967 ntBASIC19.76■□□□□ 0.75
TMEM88BA6NKF7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TMEM88BA6NKF7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.76■□□□□ 0.75
TMEM88BA6NKF7 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC19.76■□□□□ 0.75
TMEM88BA6NKF7 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.76■□□□□ 0.75
TMEM88BA6NKF7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM88BA6NKF7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.76■□□□□ 0.75
TMEM88BA6NKF7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TMEM88BA6NKF7 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM88BA6NKF7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM88BA6NKF7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.75■□□□□ 0.75
TMEM88BA6NKF7 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM88BA6NKF7 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC19.75■□□□□ 0.75
TMEM88BA6NKF7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC19.75■□□□□ 0.75
TMEM88BA6NKF7 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC19.75■□□□□ 0.75
TMEM88BA6NKF7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC19.75■□□□□ 0.75
TMEM88BA6NKF7 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TMEM88BA6NKF7 CROCCP4-201ENST00000457096 498 ntBASIC19.75■□□□□ 0.75
TMEM88BA6NKF7 AL583810.1-201ENST00000553344 1045 ntBASIC19.75■□□□□ 0.75
TMEM88BA6NKF7 AC008735.3-201ENST00000596646 500 ntBASIC19.75■□□□□ 0.75
TMEM88BA6NKF7 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC19.75■□□□□ 0.75
TMEM88BA6NKF7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TMEM88BA6NKF7 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM88BA6NKF7 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
TMEM88BA6NKF7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM88BA6NKF7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.75■□□□□ 0.75
TMEM88BA6NKF7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM88BA6NKF7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM88BA6NKF7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.75■□□□□ 0.75
TMEM88BA6NKF7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM88BA6NKF7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM88BA6NKF7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TMEM88BA6NKF7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.74■□□□□ 0.75
TMEM88BA6NKF7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM88BA6NKF7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.74■□□□□ 0.75
TMEM88BA6NKF7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM88BA6NKF7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM88BA6NKF7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM88BA6NKF7 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM88BA6NKF7 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TMEM88BA6NKF7 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM88BA6NKF7 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC19.74■□□□□ 0.75
TMEM88BA6NKF7 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM88BA6NKF7 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC19.74■□□□□ 0.75
TMEM88BA6NKF7 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC19.74■□□□□ 0.75
TMEM88BA6NKF7 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM88BA6NKF7 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TMEM88BA6NKF7 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC19.74■□□□□ 0.75
TMEM88BA6NKF7 ARL16-210ENST00000574938 751 ntTSL 2 BASIC19.74■□□□□ 0.75
TMEM88BA6NKF7 CTBP2P3-201ENST00000585629 1255 ntBASIC19.74■□□□□ 0.75
TMEM88BA6NKF7 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
TMEM88BA6NKF7 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC19.74■□□□□ 0.75
TMEM88BA6NKF7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM88BA6NKF7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM88BA6NKF7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TMEM88BA6NKF7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM88BA6NKF7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TMEM88BA6NKF7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM88BA6NKF7 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM88BA6NKF7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TMEM88BA6NKF7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM88BA6NKF7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM88BA6NKF7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM88BA6NKF7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.73■□□□□ 0.75
TMEM88BA6NKF7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM88BA6NKF7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM88BA6NKF7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.73■□□□□ 0.75
TMEM88BA6NKF7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM88BA6NKF7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.73■□□□□ 0.75
TMEM88BA6NKF7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.73■□□□□ 0.75
TMEM88BA6NKF7 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM88BA6NKF7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
TMEM88BA6NKF7 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms