Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GDNFP39905 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
GDNFP39905 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GDNFP39905 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GDNFP39905 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GDNFP39905 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GDNFP39905 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.9■□□□□ 0.94
GDNFP39905 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GDNFP39905 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.9■□□□□ 0.94
GDNFP39905 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GDNFP39905 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GDNFP39905 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GDNFP39905 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GDNFP39905 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
GDNFP39905 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
GDNFP39905 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
GDNFP39905 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
GDNFP39905 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
GDNFP39905 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
GDNFP39905 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GDNFP39905 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
GDNFP39905 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GDNFP39905 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.88■□□□□ 0.93
GDNFP39905 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GDNFP39905 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GDNFP39905 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
GDNFP39905 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
GDNFP39905 ZNRF2P2-203ENST00000454624 420 ntBASIC20.87■□□□□ 0.93
GDNFP39905 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.87■□□□□ 0.93
GDNFP39905 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GDNFP39905 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GDNFP39905 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
GDNFP39905 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GDNFP39905 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GDNFP39905 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
GDNFP39905 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
GDNFP39905 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GDNFP39905 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GDNFP39905 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
GDNFP39905 AC012676.1-201ENST00000574705 1949 ntBASIC20.85■□□□□ 0.93
GDNFP39905 ABHD17AP4-201ENST00000411545 909 ntBASIC20.85■□□□□ 0.93
GDNFP39905 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.85■□□□□ 0.93
GDNFP39905 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GDNFP39905 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.85■□□□□ 0.93
GDNFP39905 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GDNFP39905 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GDNFP39905 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GDNFP39905 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GDNFP39905 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GDNFP39905 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.84■□□□□ 0.93
GDNFP39905 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.84■□□□□ 0.93
GDNFP39905 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.84■□□□□ 0.93
GDNFP39905 LINC01971-201ENST00000617888 1048 ntBASIC20.84■□□□□ 0.93
GDNFP39905 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GDNFP39905 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GDNFP39905 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GDNFP39905 AC110285.7-201ENST00000624417 1536 ntBASIC20.83■□□□□ 0.93
GDNFP39905 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GDNFP39905 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GDNFP39905 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GDNFP39905 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GDNFP39905 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GDNFP39905 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GDNFP39905 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
GDNFP39905 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
GDNFP39905 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
GDNFP39905 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GDNFP39905 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.82■□□□□ 0.92
GDNFP39905 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.82■□□□□ 0.92
GDNFP39905 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
GDNFP39905 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.81■□□□□ 0.92
GDNFP39905 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.81■□□□□ 0.92
GDNFP39905 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GDNFP39905 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.81■□□□□ 0.92
GDNFP39905 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GDNFP39905 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.81■□□□□ 0.92
GDNFP39905 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
GDNFP39905 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GDNFP39905 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GDNFP39905 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.8■□□□□ 0.92
GDNFP39905 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.8■□□□□ 0.92
GDNFP39905 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
GDNFP39905 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
GDNFP39905 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.8■□□□□ 0.92
GDNFP39905 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GDNFP39905 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
GDNFP39905 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
GDNFP39905 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GDNFP39905 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.79■□□□□ 0.92
GDNFP39905 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
GDNFP39905 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GDNFP39905 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GDNFP39905 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.78■□□□□ 0.92
GDNFP39905 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.78■□□□□ 0.92
GDNFP39905 DUX4L11-201ENST00000611504 1267 ntBASIC20.78■□□□□ 0.92
GDNFP39905 DUX4L12-201ENST00000614593 1267 ntBASIC20.78■□□□□ 0.92
GDNFP39905 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.78■□□□□ 0.92
GDNFP39905 DUX4L14-201ENST00000621227 1267 ntBASIC20.78■□□□□ 0.92
GDNFP39905 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GDNFP39905 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms