Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CKS2P33552 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CKS2P33552 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CKS2P33552 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CKS2P33552 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CKS2P33552 RARRES2P7-201ENST00000567349 469 ntBASIC17.68■□□□□ 0.42
CKS2P33552 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.68■□□□□ 0.42
CKS2P33552 AC012676.1-201ENST00000574705 1949 ntBASIC17.68■□□□□ 0.42
CKS2P33552 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CKS2P33552 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CKS2P33552 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CKS2P33552 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
CKS2P33552 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CKS2P33552 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CKS2P33552 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CKS2P33552 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CKS2P33552 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CKS2P33552 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CKS2P33552 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC17.67■□□□□ 0.42
CKS2P33552 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CKS2P33552 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CKS2P33552 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC17.67■□□□□ 0.42
CKS2P33552 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.67■□□□□ 0.42
CKS2P33552 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CKS2P33552 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CKS2P33552 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CKS2P33552 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CKS2P33552 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CKS2P33552 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CKS2P33552 PKD1P6-201ENST00000343738 4769 ntBASIC17.66■□□□□ 0.42
CKS2P33552 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CKS2P33552 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC17.65■□□□□ 0.42
CKS2P33552 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CKS2P33552 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CKS2P33552 AL391121.1-201ENST00000607967 1349 ntBASIC17.65■□□□□ 0.42
CKS2P33552 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CKS2P33552 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CKS2P33552 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CKS2P33552 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC17.65■□□□□ 0.42
CKS2P33552 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CKS2P33552 WHAMMP3-201ENST00000611636 1609 ntBASIC17.65■□□□□ 0.42
CKS2P33552 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CKS2P33552 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CKS2P33552 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CKS2P33552 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.64■□□□□ 0.41
CKS2P33552 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CKS2P33552 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CKS2P33552 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CKS2P33552 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC17.63■□□□□ 0.41
CKS2P33552 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CKS2P33552 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CKS2P33552 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.63■□□□□ 0.41
CKS2P33552 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CKS2P33552 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
CKS2P33552 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CKS2P33552 EI24-212ENST00000615917 1407 ntTSL 2 BASIC17.63■□□□□ 0.41
CKS2P33552 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CKS2P33552 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CKS2P33552 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CKS2P33552 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CKS2P33552 RPS2-209ENST00000529806 993 ntTSL 3 BASIC17.62■□□□□ 0.41
CKS2P33552 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CKS2P33552 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CKS2P33552 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC17.62■□□□□ 0.41
CKS2P33552 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CKS2P33552 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CKS2P33552 LINC00273-201ENST00000539813 1452 ntBASIC17.62■□□□□ 0.41
CKS2P33552 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CKS2P33552 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC17.61■□□□□ 0.41
CKS2P33552 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC17.61■□□□□ 0.41
CKS2P33552 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CKS2P33552 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CKS2P33552 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CKS2P33552 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CKS2P33552 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CKS2P33552 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CKS2P33552 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CKS2P33552 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.6■□□□□ 0.41
CKS2P33552 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CKS2P33552 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC17.6■□□□□ 0.41
CKS2P33552 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC17.6■□□□□ 0.41
CKS2P33552 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CKS2P33552 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.6■□□□□ 0.41
CKS2P33552 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CKS2P33552 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CKS2P33552 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CKS2P33552 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CKS2P33552 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CKS2P33552 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CKS2P33552 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.59■□□□□ 0.41
CKS2P33552 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CKS2P33552 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CKS2P33552 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC17.59■□□□□ 0.41
CKS2P33552 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CKS2P33552 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC17.59■□□□□ 0.41
CKS2P33552 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
CKS2P33552 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC17.59■□□□□ 0.41
CKS2P33552 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CKS2P33552 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CKS2P33552 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms