Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SCAF4O95104 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SCAF4O95104 AC133561.1-201ENST00000568600 2415 ntBASIC19.57■□□□□ 0.72
SCAF4O95104 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCAF4O95104 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
SCAF4O95104 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCAF4O95104 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SCAF4O95104 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.57■□□□□ 0.72
SCAF4O95104 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCAF4O95104 WHAMMP3-201ENST00000611636 1609 ntBASIC19.57■□□□□ 0.72
SCAF4O95104 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCAF4O95104 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
SCAF4O95104 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCAF4O95104 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.57■□□□□ 0.72
SCAF4O95104 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCAF4O95104 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SCAF4O95104 AC010501.1-201ENST00000606270 1962 ntBASIC19.56■□□□□ 0.72
SCAF4O95104 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCAF4O95104 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
SCAF4O95104 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.56■□□□□ 0.72
SCAF4O95104 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCAF4O95104 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.56■□□□□ 0.72
SCAF4O95104 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SCAF4O95104 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SCAF4O95104 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.55■□□□□ 0.72
SCAF4O95104 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.55■□□□□ 0.72
SCAF4O95104 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCAF4O95104 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCAF4O95104 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.55■□□□□ 0.72
SCAF4O95104 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCAF4O95104 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SCAF4O95104 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SCAF4O95104 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SCAF4O95104 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCAF4O95104 ZNRF2P2-203ENST00000454624 420 ntBASIC19.54■□□□□ 0.72
SCAF4O95104 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SCAF4O95104 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCAF4O95104 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.54■□□□□ 0.72
SCAF4O95104 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SCAF4O95104 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCAF4O95104 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCAF4O95104 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.53■□□□□ 0.72
SCAF4O95104 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCAF4O95104 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SCAF4O95104 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SCAF4O95104 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SCAF4O95104 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCAF4O95104 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.52■□□□□ 0.72
SCAF4O95104 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCAF4O95104 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.52■□□□□ 0.72
SCAF4O95104 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
SCAF4O95104 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCAF4O95104 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SCAF4O95104 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.51■□□□□ 0.71
SCAF4O95104 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCAF4O95104 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SCAF4O95104 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SCAF4O95104 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SCAF4O95104 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCAF4O95104 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCAF4O95104 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.51■□□□□ 0.71
SCAF4O95104 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCAF4O95104 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCAF4O95104 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.51■□□□□ 0.71
SCAF4O95104 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SCAF4O95104 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCAF4O95104 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCAF4O95104 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SCAF4O95104 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCAF4O95104 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.5■□□□□ 0.71
SCAF4O95104 AC012676.1-201ENST00000574705 1949 ntBASIC19.5■□□□□ 0.71
SCAF4O95104 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SCAF4O95104 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCAF4O95104 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SCAF4O95104 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.5■□□□□ 0.71
SCAF4O95104 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCAF4O95104 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SCAF4O95104 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCAF4O95104 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.49■□□□□ 0.71
SCAF4O95104 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.48■□□□□ 0.71
SCAF4O95104 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.48■□□□□ 0.71
SCAF4O95104 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.48■□□□□ 0.71
SCAF4O95104 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.48■□□□□ 0.71
SCAF4O95104 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCAF4O95104 MIR7108-201ENST00000614319 87 ntBASIC19.48■□□□□ 0.71
SCAF4O95104 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SCAF4O95104 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
SCAF4O95104 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCAF4O95104 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCAF4O95104 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCAF4O95104 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.47■□□□□ 0.71
SCAF4O95104 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.47■□□□□ 0.71
SCAF4O95104 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCAF4O95104 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SCAF4O95104 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCAF4O95104 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCAF4O95104 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.47■□□□□ 0.71
SCAF4O95104 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCAF4O95104 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SCAF4O95104 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms