Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV27A0A0K0K1C4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV27A0A0K0K1C4 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC17.07■□□□□ 0.32
TRBV27A0A0K0K1C4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRBV27A0A0K0K1C4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV27A0A0K0K1C4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV27A0A0K0K1C4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.06■□□□□ 0.32
TRBV27A0A0K0K1C4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC17.06■□□□□ 0.32
TRBV27A0A0K0K1C4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV27A0A0K0K1C4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV27A0A0K0K1C4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV27A0A0K0K1C4 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TRBV27A0A0K0K1C4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV27A0A0K0K1C4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV27A0A0K0K1C4 EED-207ENST00000528180 1745 ntTSL 5 BASIC17.05■□□□□ 0.32
TRBV27A0A0K0K1C4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV27A0A0K0K1C4 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV27A0A0K0K1C4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC17.05■□□□□ 0.32
TRBV27A0A0K0K1C4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV27A0A0K0K1C4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV27A0A0K0K1C4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV27A0A0K0K1C4 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV27A0A0K0K1C4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV27A0A0K0K1C4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TRBV27A0A0K0K1C4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV27A0A0K0K1C4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV27A0A0K0K1C4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV27A0A0K0K1C4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV27A0A0K0K1C4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV27A0A0K0K1C4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV27A0A0K0K1C4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TRBV27A0A0K0K1C4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV27A0A0K0K1C4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.04■□□□□ 0.32
TRBV27A0A0K0K1C4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC17.04■□□□□ 0.32
TRBV27A0A0K0K1C4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV27A0A0K0K1C4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV27A0A0K0K1C4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TRBV27A0A0K0K1C4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.03■□□□□ 0.32
TRBV27A0A0K0K1C4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV27A0A0K0K1C4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV27A0A0K0K1C4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC17.03■□□□□ 0.32
TRBV27A0A0K0K1C4 AP003733.4-201ENST00000623785 1697 ntBASIC17.03■□□□□ 0.32
TRBV27A0A0K0K1C4 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV27A0A0K0K1C4 AC087741.3-201ENST00000624270 1347 ntBASIC17.02■□□□□ 0.32
TRBV27A0A0K0K1C4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV27A0A0K0K1C4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TRBV27A0A0K0K1C4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV27A0A0K0K1C4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TRBV27A0A0K0K1C4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC17.02■□□□□ 0.32
TRBV27A0A0K0K1C4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC17.02■□□□□ 0.32
TRBV27A0A0K0K1C4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC17.02■□□□□ 0.31
TRBV27A0A0K0K1C4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRBV27A0A0K0K1C4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRBV27A0A0K0K1C4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRBV27A0A0K0K1C4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV27A0A0K0K1C4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV27A0A0K0K1C4 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV27A0A0K0K1C4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV27A0A0K0K1C4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC17.01■□□□□ 0.31
TRBV27A0A0K0K1C4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV27A0A0K0K1C4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV27A0A0K0K1C4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC17.01■□□□□ 0.31
TRBV27A0A0K0K1C4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV27A0A0K0K1C4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRBV27A0A0K0K1C4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV27A0A0K0K1C4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV27A0A0K0K1C4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC17■□□□□ 0.31
TRBV27A0A0K0K1C4 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV27A0A0K0K1C4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC16.99■□□□□ 0.31
TRBV27A0A0K0K1C4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV27A0A0K0K1C4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRBV27A0A0K0K1C4 AC044849.2-201ENST00000606596 710 ntBASIC16.99■□□□□ 0.31
TRBV27A0A0K0K1C4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV27A0A0K0K1C4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV27A0A0K0K1C4 LINC01124-201ENST00000409786 2117 ntBASIC16.99■□□□□ 0.31
TRBV27A0A0K0K1C4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV27A0A0K0K1C4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV27A0A0K0K1C4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV27A0A0K0K1C4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV27A0A0K0K1C4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV27A0A0K0K1C4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV27A0A0K0K1C4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC16.98■□□□□ 0.31
TRBV27A0A0K0K1C4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV27A0A0K0K1C4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV27A0A0K0K1C4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV27A0A0K0K1C4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV27A0A0K0K1C4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC16.97■□□□□ 0.31
TRBV27A0A0K0K1C4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TRBV27A0A0K0K1C4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV27A0A0K0K1C4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC16.97■□□□□ 0.31
TRBV27A0A0K0K1C4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV27A0A0K0K1C4 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV27A0A0K0K1C4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
TRBV27A0A0K0K1C4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV27A0A0K0K1C4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV27A0A0K0K1C4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TRBV27A0A0K0K1C4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC16.96■□□□□ 0.31
TRBV27A0A0K0K1C4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
TRBV27A0A0K0K1C4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRBV27A0A0K0K1C4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms