Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 HLA-B-256ENST00000639848 1089 ntBASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 AC138035.3-201ENST00000622706 2791 ntBASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 GPAT2P1-201ENST00000444924 1672 ntBASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 MCCD1P1-208ENST00000445732 328 ntBASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 AF201337.1-201ENST00000520239 748 ntBASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 PNMA6B-201ENST00000538162 1200 ntBASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 AC008687.6-201ENST00000596318 630 ntBASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 AC092118.2-201ENST00000613495 667 ntBASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 AC116407.2-201ENST00000613639 860 ntBASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 AC131212.4-201ENST00000623606 975 ntBASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CHTOPQ9Y3Y2 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 AC092068.3-201ENST00000587894 2016 ntBASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms