Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 MRPL3P1-201ENST00000400109 1033 ntBASIC18.88■□□□□ 0.61
L1RE1Q9UN81 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 AD001527.2-201ENST00000622994 785 ntBASIC18.88■□□□□ 0.61
L1RE1Q9UN81 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.88■□□□□ 0.61
L1RE1Q9UN81 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 BX276092.7-203ENST00000637198 1536 ntBASIC18.88■□□□□ 0.61
L1RE1Q9UN81 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 FLJ38576-201ENST00000623820 2459 ntBASIC18.88■□□□□ 0.61
L1RE1Q9UN81 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
L1RE1Q9UN81 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
L1RE1Q9UN81 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
L1RE1Q9UN81 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
L1RE1Q9UN81 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.87■□□□□ 0.61
L1RE1Q9UN81 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
L1RE1Q9UN81 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.87■□□□□ 0.61
L1RE1Q9UN81 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
L1RE1Q9UN81 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
L1RE1Q9UN81 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
L1RE1Q9UN81 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
L1RE1Q9UN81 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
L1RE1Q9UN81 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
L1RE1Q9UN81 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
L1RE1Q9UN81 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.87■□□□□ 0.61
L1RE1Q9UN81 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.87■□□□□ 0.61
L1RE1Q9UN81 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.87■□□□□ 0.61
L1RE1Q9UN81 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
L1RE1Q9UN81 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
L1RE1Q9UN81 SLC25A6P4-201ENST00000586535 553 ntBASIC18.87■□□□□ 0.61
L1RE1Q9UN81 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.87■□□□□ 0.61
L1RE1Q9UN81 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
L1RE1Q9UN81 AC019129.2-201ENST00000609837 1235 ntBASIC18.87■□□□□ 0.61
L1RE1Q9UN81 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.87■□□□□ 0.61
L1RE1Q9UN81 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
L1RE1Q9UN81 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.87■□□□□ 0.61
L1RE1Q9UN81 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
L1RE1Q9UN81 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
L1RE1Q9UN81 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
L1RE1Q9UN81 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
L1RE1Q9UN81 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
L1RE1Q9UN81 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
L1RE1Q9UN81 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
L1RE1Q9UN81 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
L1RE1Q9UN81 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.86■□□□□ 0.61
L1RE1Q9UN81 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.86■□□□□ 0.61
L1RE1Q9UN81 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
L1RE1Q9UN81 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.86■□□□□ 0.61
L1RE1Q9UN81 AC133963.1-201ENST00000504166 1679 ntBASIC18.86■□□□□ 0.61
L1RE1Q9UN81 PMPCAP1-201ENST00000508114 1576 ntBASIC18.86■□□□□ 0.61
L1RE1Q9UN81 AL049757.1-201ENST00000616842 1596 ntBASIC18.86■□□□□ 0.61
L1RE1Q9UN81 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
L1RE1Q9UN81 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
L1RE1Q9UN81 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
L1RE1Q9UN81 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
L1RE1Q9UN81 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
L1RE1Q9UN81 AC103564.2-201ENST00000432853 1299 ntBASIC18.86■□□□□ 0.61
L1RE1Q9UN81 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.86■□□□□ 0.61
L1RE1Q9UN81 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
L1RE1Q9UN81 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.86■□□□□ 0.61
L1RE1Q9UN81 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
L1RE1Q9UN81 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.86■□□□□ 0.61
L1RE1Q9UN81 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.86■□□□□ 0.61
L1RE1Q9UN81 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.86■□□□□ 0.61
L1RE1Q9UN81 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.86■□□□□ 0.61
L1RE1Q9UN81 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
L1RE1Q9UN81 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
L1RE1Q9UN81 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
L1RE1Q9UN81 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms