Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 AC092068.3-201ENST00000587894 2016 ntBASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 ARMC10P1-201ENST00000313754 855 ntBASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 AP005901.3-202ENST00000581653 237 ntBASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 AC132938.5-201ENST00000624980 1813 ntBASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 KLF4P1-201ENST00000412782 1185 ntBASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 FAM86EP-206ENST00000510506 987 ntBASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 AD001527.2-201ENST00000622994 785 ntBASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LRTM1Q9HBL6 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRTM1Q9HBL6 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
LRTM1Q9HBL6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRTM1Q9HBL6 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRTM1Q9HBL6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.58■□□□□ 0.24
LRTM1Q9HBL6 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.58■□□□□ 0.24
LRTM1Q9HBL6 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
LRTM1Q9HBL6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
LRTM1Q9HBL6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRTM1Q9HBL6 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRTM1Q9HBL6 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRTM1Q9HBL6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.58■□□□□ 0.24
LRTM1Q9HBL6 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LRTM1Q9HBL6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.58■□□□□ 0.24
LRTM1Q9HBL6 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.58■□□□□ 0.24
LRTM1Q9HBL6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.58■□□□□ 0.24
LRTM1Q9HBL6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.58■□□□□ 0.24
LRTM1Q9HBL6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
LRTM1Q9HBL6 KRT18P1-202ENST00000452408 1331 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms