Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.3■□□□□ 0.84
RNF41Q9H4P4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF41Q9H4P4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RNF41Q9H4P4 RNA5SP415-201ENST00000517246 115 ntBASIC20.3■□□□□ 0.84
RNF41Q9H4P4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF41Q9H4P4 UNC93B6-202ENST00000528242 690 ntBASIC20.3■□□□□ 0.84
RNF41Q9H4P4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.3■□□□□ 0.84
RNF41Q9H4P4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF41Q9H4P4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF41Q9H4P4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
RNF41Q9H4P4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF41Q9H4P4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RNF41Q9H4P4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RNF41Q9H4P4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF41Q9H4P4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF41Q9H4P4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF41Q9H4P4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RNF41Q9H4P4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF41Q9H4P4 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.29■□□□□ 0.84
RNF41Q9H4P4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RNF41Q9H4P4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF41Q9H4P4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF41Q9H4P4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF41Q9H4P4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF41Q9H4P4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RNF41Q9H4P4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF41Q9H4P4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF41Q9H4P4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF41Q9H4P4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
RNF41Q9H4P4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF41Q9H4P4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF41Q9H4P4 PAWRP1-201ENST00000451083 565 ntBASIC20.29■□□□□ 0.84
RNF41Q9H4P4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF41Q9H4P4 AC145285.3-201ENST00000564603 959 ntBASIC20.29■□□□□ 0.84
RNF41Q9H4P4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF41Q9H4P4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF41Q9H4P4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RNF41Q9H4P4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF41Q9H4P4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF41Q9H4P4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
RNF41Q9H4P4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF41Q9H4P4 LETM1P2-201ENST00000597330 2178 ntBASIC20.29■□□□□ 0.84
RNF41Q9H4P4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF41Q9H4P4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RNF41Q9H4P4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RNF41Q9H4P4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF41Q9H4P4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF41Q9H4P4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RNF41Q9H4P4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF41Q9H4P4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF41Q9H4P4 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.29■□□□□ 0.84
RNF41Q9H4P4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF41Q9H4P4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF41Q9H4P4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF41Q9H4P4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF41Q9H4P4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF41Q9H4P4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.28■□□□□ 0.84
RNF41Q9H4P4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.28■□□□□ 0.84
RNF41Q9H4P4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF41Q9H4P4 RPL13AP23-201ENST00000480739 586 ntBASIC20.28■□□□□ 0.84
RNF41Q9H4P4 AC108751.1-201ENST00000490852 363 ntBASIC20.28■□□□□ 0.84
RNF41Q9H4P4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.28■□□□□ 0.84
RNF41Q9H4P4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.28■□□□□ 0.84
RNF41Q9H4P4 Z83851.2-201ENST00000609564 659 ntBASIC20.28■□□□□ 0.84
RNF41Q9H4P4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.28■□□□□ 0.84
RNF41Q9H4P4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF41Q9H4P4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF41Q9H4P4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF41Q9H4P4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF41Q9H4P4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF41Q9H4P4 AL645608.8-201ENST00000606034 2086 ntBASIC20.28■□□□□ 0.84
RNF41Q9H4P4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
RNF41Q9H4P4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF41Q9H4P4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
RNF41Q9H4P4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF41Q9H4P4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
RNF41Q9H4P4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.27■□□□□ 0.84
RNF41Q9H4P4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF41Q9H4P4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF41Q9H4P4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF41Q9H4P4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.27■□□□□ 0.84
RNF41Q9H4P4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF41Q9H4P4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF41Q9H4P4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
RNF41Q9H4P4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.27■□□□□ 0.84
RNF41Q9H4P4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF41Q9H4P4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF41Q9H4P4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF41Q9H4P4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RNF41Q9H4P4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF41Q9H4P4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF41Q9H4P4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.27■□□□□ 0.84
RNF41Q9H4P4 AC009947.1-201ENST00000444350 727 ntBASIC20.27■□□□□ 0.84
RNF41Q9H4P4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF41Q9H4P4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.27■□□□□ 0.84
RNF41Q9H4P4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF41Q9H4P4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF41Q9H4P4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF41Q9H4P4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RNF41Q9H4P4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms