Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 AC012317.2-201ENST00000623305 2251 ntBASIC17.93■□□□□ 0.46
LRRC3Q9BY71 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC3Q9BY71 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC3Q9BY71 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
LRRC3Q9BY71 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
LRRC3Q9BY71 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.93■□□□□ 0.46
LRRC3Q9BY71 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
LRRC3Q9BY71 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC3Q9BY71 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC3Q9BY71 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
LRRC3Q9BY71 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC3Q9BY71 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.93■□□□□ 0.46
LRRC3Q9BY71 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
LRRC3Q9BY71 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC3Q9BY71 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.93■□□□□ 0.46
LRRC3Q9BY71 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC3Q9BY71 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.93■□□□□ 0.46
LRRC3Q9BY71 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.93■□□□□ 0.46
LRRC3Q9BY71 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC3Q9BY71 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC3Q9BY71 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.93■□□□□ 0.46
LRRC3Q9BY71 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.93■□□□□ 0.46
LRRC3Q9BY71 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC3Q9BY71 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
LRRC3Q9BY71 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC3Q9BY71 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.93■□□□□ 0.46
LRRC3Q9BY71 AC129492.6-201ENST00000611383 1305 ntBASIC17.93■□□□□ 0.46
LRRC3Q9BY71 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC3Q9BY71 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.93■□□□□ 0.46
LRRC3Q9BY71 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC3Q9BY71 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC3Q9BY71 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC3Q9BY71 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC3Q9BY71 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
LRRC3Q9BY71 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC3Q9BY71 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.92■□□□□ 0.46
LRRC3Q9BY71 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LRRC3Q9BY71 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.92■□□□□ 0.46
LRRC3Q9BY71 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC3Q9BY71 AL513480.1-201ENST00000451731 511 ntBASIC17.92■□□□□ 0.46
LRRC3Q9BY71 AC107918.2-201ENST00000530817 355 ntBASIC17.92■□□□□ 0.46
LRRC3Q9BY71 RFPL4AP1-201ENST00000530883 850 ntBASIC17.92■□□□□ 0.46
LRRC3Q9BY71 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.92■□□□□ 0.46
LRRC3Q9BY71 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC3Q9BY71 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.92■□□□□ 0.46
LRRC3Q9BY71 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC3Q9BY71 AL513210.1-201ENST00000629608 234 ntBASIC17.92■□□□□ 0.46
LRRC3Q9BY71 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.92■□□□□ 0.46
LRRC3Q9BY71 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC3Q9BY71 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC3Q9BY71 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
LRRC3Q9BY71 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC3Q9BY71 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
LRRC3Q9BY71 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC3Q9BY71 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC3Q9BY71 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC3Q9BY71 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LRRC3Q9BY71 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC3Q9BY71 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
LRRC3Q9BY71 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.92■□□□□ 0.46
LRRC3Q9BY71 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC3Q9BY71 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC3Q9BY71 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC3Q9BY71 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC3Q9BY71 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC3Q9BY71 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC3Q9BY71 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
LRRC3Q9BY71 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC3Q9BY71 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC3Q9BY71 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC3Q9BY71 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
LRRC3Q9BY71 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.91■□□□□ 0.46
LRRC3Q9BY71 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.91■□□□□ 0.46
LRRC3Q9BY71 AP000344.2-201ENST00000512987 629 ntBASIC17.91■□□□□ 0.46
LRRC3Q9BY71 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.91■□□□□ 0.46
LRRC3Q9BY71 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
LRRC3Q9BY71 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.91■□□□□ 0.46
LRRC3Q9BY71 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC3Q9BY71 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
LRRC3Q9BY71 AC105339.1-204ENST00000636249 355 ntBASIC17.91■□□□□ 0.46
LRRC3Q9BY71 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC3Q9BY71 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC3Q9BY71 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
LRRC3Q9BY71 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.91■□□□□ 0.46
LRRC3Q9BY71 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC3Q9BY71 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.91■□□□□ 0.46
LRRC3Q9BY71 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
LRRC3Q9BY71 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC3Q9BY71 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
LRRC3Q9BY71 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC3Q9BY71 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC3Q9BY71 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
LRRC3Q9BY71 LTB4R2-202ENST00000528054 3092 ntBASIC17.9■□□□□ 0.46
LRRC3Q9BY71 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC3Q9BY71 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC3Q9BY71 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC3Q9BY71 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.9■□□□□ 0.46
LRRC3Q9BY71 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
LRRC3Q9BY71 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
LRRC3Q9BY71 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 191.6 ms