Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CASD1Q96PB1 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.25■□□□□ 0.51
CASD1Q96PB1 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CASD1Q96PB1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CASD1Q96PB1 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CASD1Q96PB1 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CASD1Q96PB1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASD1Q96PB1 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CASD1Q96PB1 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASD1Q96PB1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
CASD1Q96PB1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASD1Q96PB1 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.24■□□□□ 0.51
CASD1Q96PB1 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.24■□□□□ 0.51
CASD1Q96PB1 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.24■□□□□ 0.51
CASD1Q96PB1 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CASD1Q96PB1 AC051619.7-201ENST00000568314 623 ntBASIC18.24■□□□□ 0.51
CASD1Q96PB1 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.24■□□□□ 0.51
CASD1Q96PB1 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.24■□□□□ 0.51
CASD1Q96PB1 EGFEM1P-202ENST00000431685 1563 ntBASIC18.24■□□□□ 0.51
CASD1Q96PB1 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.24■□□□□ 0.51
CASD1Q96PB1 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASD1Q96PB1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CASD1Q96PB1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CASD1Q96PB1 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CASD1Q96PB1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CASD1Q96PB1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.23■□□□□ 0.51
CASD1Q96PB1 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CASD1Q96PB1 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CASD1Q96PB1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CASD1Q96PB1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CASD1Q96PB1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.23■□□□□ 0.51
CASD1Q96PB1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.23■□□□□ 0.51
CASD1Q96PB1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CASD1Q96PB1 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.23■□□□□ 0.51
CASD1Q96PB1 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CASD1Q96PB1 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CASD1Q96PB1 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CASD1Q96PB1 SLC22A20-204ENST00000530038 1673 ntBASIC18.23■□□□□ 0.51
CASD1Q96PB1 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.23■□□□□ 0.51
CASD1Q96PB1 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CASD1Q96PB1 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CASD1Q96PB1 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CASD1Q96PB1 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CASD1Q96PB1 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CASD1Q96PB1 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CASD1Q96PB1 RBPMS2P1-201ENST00000437762 623 ntBASIC18.23■□□□□ 0.51
CASD1Q96PB1 CNN2P2-201ENST00000443536 909 ntBASIC18.23■□□□□ 0.51
CASD1Q96PB1 CNN2P3-201ENST00000450201 906 ntBASIC18.23■□□□□ 0.51
CASD1Q96PB1 AC069262.1-201ENST00000539058 672 ntBASIC18.23■□□□□ 0.51
CASD1Q96PB1 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CASD1Q96PB1 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
CASD1Q96PB1 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CASD1Q96PB1 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.23■□□□□ 0.51
CASD1Q96PB1 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CASD1Q96PB1 AL136317.3-201ENST00000618497 906 ntBASIC18.23■□□□□ 0.51
CASD1Q96PB1 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CASD1Q96PB1 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CASD1Q96PB1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.23■□□□□ 0.51
CASD1Q96PB1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CASD1Q96PB1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CASD1Q96PB1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CASD1Q96PB1 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CASD1Q96PB1 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CASD1Q96PB1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CASD1Q96PB1 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CASD1Q96PB1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CASD1Q96PB1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CASD1Q96PB1 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CASD1Q96PB1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CASD1Q96PB1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.22■□□□□ 0.51
CASD1Q96PB1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CASD1Q96PB1 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CASD1Q96PB1 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CASD1Q96PB1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CASD1Q96PB1 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CASD1Q96PB1 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.22■□□□□ 0.51
CASD1Q96PB1 SLC25A1P3-201ENST00000395415 828 ntBASIC18.22■□□□□ 0.51
CASD1Q96PB1 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CASD1Q96PB1 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CASD1Q96PB1 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CASD1Q96PB1 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CASD1Q96PB1 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CASD1Q96PB1 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.22■□□□□ 0.51
CASD1Q96PB1 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CASD1Q96PB1 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.22■□□□□ 0.51
CASD1Q96PB1 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CASD1Q96PB1 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.22■□□□□ 0.51
CASD1Q96PB1 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.22■□□□□ 0.51
CASD1Q96PB1 AC084121.4-201ENST00000641598 221 ntBASIC18.22■□□□□ 0.51
CASD1Q96PB1 AF228730.8-201ENST00000642140 221 ntBASIC18.22■□□□□ 0.51
CASD1Q96PB1 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CASD1Q96PB1 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
CASD1Q96PB1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.22■□□□□ 0.51
CASD1Q96PB1 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CASD1Q96PB1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CASD1Q96PB1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CASD1Q96PB1 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CASD1Q96PB1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CASD1Q96PB1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CASD1Q96PB1 TUBB3P1-201ENST00000405796 1332 ntBASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms