Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 CRYGEP-201ENST00000412192 528 ntBASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 IGLL3P-201ENST00000412472 434 ntBASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 MED15P5-201ENST00000423150 992 ntBASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 DUX4L17-201ENST00000557360 1267 ntBASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 AC064836.3-201ENST00000607928 673 ntBASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ECHDC3Q96DC8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ECHDC3Q96DC8 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.17■□□□□ 0.34
ECHDC3Q96DC8 AC002310.6-201ENST00000624451 1377 ntBASIC17.17■□□□□ 0.34
ECHDC3Q96DC8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ECHDC3Q96DC8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.17■□□□□ 0.34
ECHDC3Q96DC8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ECHDC3Q96DC8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ECHDC3Q96DC8 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ECHDC3Q96DC8 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ECHDC3Q96DC8 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.17■□□□□ 0.34
ECHDC3Q96DC8 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.17■□□□□ 0.34
ECHDC3Q96DC8 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.17■□□□□ 0.34
ECHDC3Q96DC8 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ECHDC3Q96DC8 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.17■□□□□ 0.34
ECHDC3Q96DC8 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.17■□□□□ 0.34
ECHDC3Q96DC8 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.17■□□□□ 0.34
ECHDC3Q96DC8 AC124947.2-201ENST00000547118 1133 ntBASIC17.17■□□□□ 0.34
ECHDC3Q96DC8 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.17■□□□□ 0.34
ECHDC3Q96DC8 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.17■□□□□ 0.34
ECHDC3Q96DC8 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.17■□□□□ 0.34
ECHDC3Q96DC8 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ECHDC3Q96DC8 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ECHDC3Q96DC8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ECHDC3Q96DC8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ECHDC3Q96DC8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.17■□□□□ 0.34
ECHDC3Q96DC8 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
ECHDC3Q96DC8 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ECHDC3Q96DC8 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.17■□□□□ 0.34
ECHDC3Q96DC8 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ECHDC3Q96DC8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.17■□□□□ 0.34
ECHDC3Q96DC8 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 AC007967.2-201ENST00000432613 625 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms