Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.24■□□□□ 0.35
TTC28Q96AY4 AL137060.1-201ENST00000618151 2648 ntBASIC17.24■□□□□ 0.35
TTC28Q96AY4 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.24■□□□□ 0.35
TTC28Q96AY4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.24■□□□□ 0.35
TTC28Q96AY4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
TTC28Q96AY4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TTC28Q96AY4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.24■□□□□ 0.35
TTC28Q96AY4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TTC28Q96AY4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC28Q96AY4 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.24■□□□□ 0.35
TTC28Q96AY4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.24■□□□□ 0.35
TTC28Q96AY4 AC005412.3-201ENST00000580309 715 ntBASIC17.24■□□□□ 0.35
TTC28Q96AY4 AC012569.1-201ENST00000591191 1524 ntBASIC17.24■□□□□ 0.35
TTC28Q96AY4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC28Q96AY4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.24■□□□□ 0.35
TTC28Q96AY4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC28Q96AY4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC28Q96AY4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.23■□□□□ 0.35
TTC28Q96AY4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TTC28Q96AY4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC28Q96AY4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC28Q96AY4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC28Q96AY4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC28Q96AY4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC28Q96AY4 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
TTC28Q96AY4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.23■□□□□ 0.35
TTC28Q96AY4 AC007551.1-201ENST00000457394 519 ntBASIC17.23■□□□□ 0.35
TTC28Q96AY4 IGHV3-52-201ENST00000519770 353 ntBASIC17.23■□□□□ 0.35
TTC28Q96AY4 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.23■□□□□ 0.35
TTC28Q96AY4 AL079307.3-201ENST00000556114 283 ntBASIC17.23■□□□□ 0.35
TTC28Q96AY4 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.23■□□□□ 0.35
TTC28Q96AY4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.23■□□□□ 0.35
TTC28Q96AY4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.23■□□□□ 0.35
TTC28Q96AY4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC28Q96AY4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.23■□□□□ 0.35
TTC28Q96AY4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC28Q96AY4 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.23■□□□□ 0.35
TTC28Q96AY4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC28Q96AY4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
TTC28Q96AY4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC28Q96AY4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC28Q96AY4 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC28Q96AY4 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.23■□□□□ 0.35
TTC28Q96AY4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC28Q96AY4 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC28Q96AY4 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC28Q96AY4 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TTC28Q96AY4 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.23■□□□□ 0.35
TTC28Q96AY4 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TTC28Q96AY4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
TTC28Q96AY4 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC28Q96AY4 AP000812.2-201ENST00000538934 718 ntBASIC17.23■□□□□ 0.35
TTC28Q96AY4 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC17.23■□□□□ 0.35
TTC28Q96AY4 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TTC28Q96AY4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.23■□□□□ 0.35
TTC28Q96AY4 SRD5A3P1-201ENST00000603021 949 ntBASIC17.23■□□□□ 0.35
TTC28Q96AY4 AL022328.3-201ENST00000607943 679 ntBASIC17.23■□□□□ 0.35
TTC28Q96AY4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.23■□□□□ 0.35
TTC28Q96AY4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.23■□□□□ 0.35
TTC28Q96AY4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TTC28Q96AY4 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TTC28Q96AY4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC28Q96AY4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TTC28Q96AY4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TTC28Q96AY4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TTC28Q96AY4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TTC28Q96AY4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.22■□□□□ 0.35
TTC28Q96AY4 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC28Q96AY4 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
TTC28Q96AY4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC28Q96AY4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TTC28Q96AY4 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC28Q96AY4 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TTC28Q96AY4 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.22■□□□□ 0.35
TTC28Q96AY4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
TTC28Q96AY4 MIR3909-201ENST00000579518 119 ntBASIC17.22■□□□□ 0.35
TTC28Q96AY4 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TTC28Q96AY4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TTC28Q96AY4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC28Q96AY4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.22■□□□□ 0.35
TTC28Q96AY4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.22■□□□□ 0.35
TTC28Q96AY4 AC093010.1-201ENST00000473625 1624 ntBASIC17.22■□□□□ 0.35
TTC28Q96AY4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC28Q96AY4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC28Q96AY4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC28Q96AY4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC28Q96AY4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TTC28Q96AY4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.22■□□□□ 0.35
TTC28Q96AY4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.22■□□□□ 0.35
TTC28Q96AY4 AC093726.1-201ENST00000608064 963 ntBASIC17.22■□□□□ 0.35
TTC28Q96AY4 AC138627.1-207ENST00000641560 1006 ntBASIC17.22■□□□□ 0.35
TTC28Q96AY4 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC28Q96AY4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC28Q96AY4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC28Q96AY4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC28Q96AY4 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
TTC28Q96AY4 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.21■□□□□ 0.35
TTC28Q96AY4 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.21■□□□□ 0.35
TTC28Q96AY4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TTC28Q96AY4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms