Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.9■□□□□ 0.46
ATG4AQ8WYN0 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.89■□□□□ 0.46
ATG4AQ8WYN0 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.89■□□□□ 0.46
ATG4AQ8WYN0 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
ATG4AQ8WYN0 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
ATG4AQ8WYN0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
ATG4AQ8WYN0 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
ATG4AQ8WYN0 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.89■□□□□ 0.46
ATG4AQ8WYN0 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 AC132938.5-201ENST00000624980 1813 ntBASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
ATG4AQ8WYN0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 AC009336.1-201ENST00000608941 1553 ntBASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 AC124947.2-201ENST00000547118 1133 ntBASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 AL603756.1-201ENST00000606511 2163 ntBASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 OR6D1P-203ENST00000641209 4860 ntBASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
ATG4AQ8WYN0 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATG4AQ8WYN0 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATG4AQ8WYN0 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.87■□□□□ 0.45
ATG4AQ8WYN0 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.87■□□□□ 0.45
ATG4AQ8WYN0 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.87■□□□□ 0.45
ATG4AQ8WYN0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
ATG4AQ8WYN0 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATG4AQ8WYN0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.87■□□□□ 0.45
ATG4AQ8WYN0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATG4AQ8WYN0 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATG4AQ8WYN0 AL031133.1-201ENST00000406807 723 ntBASIC17.87■□□□□ 0.45
ATG4AQ8WYN0 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ATG4AQ8WYN0 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ATG4AQ8WYN0 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
ATG4AQ8WYN0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
ATG4AQ8WYN0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms