Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB11FIP4Q86YS3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAB11FIP4Q86YS3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB11FIP4Q86YS3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB11FIP4Q86YS3 AC004870.1-201ENST00000315132 882 ntBASIC20.24■□□□□ 0.83
RAB11FIP4Q86YS3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.24■□□□□ 0.83
RAB11FIP4Q86YS3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.24■□□□□ 0.83
RAB11FIP4Q86YS3 LINC00982-205ENST00000420957 435 ntBASIC20.24■□□□□ 0.83
RAB11FIP4Q86YS3 HNRNPDP1-201ENST00000439535 754 ntBASIC20.24■□□□□ 0.83
RAB11FIP4Q86YS3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.24■□□□□ 0.83
RAB11FIP4Q86YS3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.24■□□□□ 0.83
RAB11FIP4Q86YS3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.24■□□□□ 0.83
RAB11FIP4Q86YS3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.24■□□□□ 0.83
RAB11FIP4Q86YS3 AL139288.1-201ENST00000623748 933 ntBASIC20.24■□□□□ 0.83
RAB11FIP4Q86YS3 AL022326.1-202ENST00000641533 845 ntBASIC20.24■□□□□ 0.83
RAB11FIP4Q86YS3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAB11FIP4Q86YS3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB11FIP4Q86YS3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
RAB11FIP4Q86YS3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.24■□□□□ 0.83
RAB11FIP4Q86YS3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB11FIP4Q86YS3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB11FIP4Q86YS3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB11FIP4Q86YS3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAB11FIP4Q86YS3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 FAM197Y8-203ENST00000450145 560 ntBASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 AC009078.2-202ENST00000463353 338 ntBASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 AC016396.2-201ENST00000562575 1417 ntBASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 AC104692.2-201ENST00000603054 253 ntBASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.23■□□□□ 0.83
RAB11FIP4Q86YS3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB11FIP4Q86YS3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.22■□□□□ 0.83
RAB11FIP4Q86YS3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB11FIP4Q86YS3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAB11FIP4Q86YS3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.22■□□□□ 0.83
RAB11FIP4Q86YS3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB11FIP4Q86YS3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAB11FIP4Q86YS3 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.22■□□□□ 0.83
RAB11FIP4Q86YS3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB11FIP4Q86YS3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB11FIP4Q86YS3 MRPL3P1-201ENST00000400109 1033 ntBASIC20.22■□□□□ 0.83
RAB11FIP4Q86YS3 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.22■□□□□ 0.83
RAB11FIP4Q86YS3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RAB11FIP4Q86YS3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.22■□□□□ 0.83
RAB11FIP4Q86YS3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.22■□□□□ 0.83
RAB11FIP4Q86YS3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.22■□□□□ 0.83
RAB11FIP4Q86YS3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.22■□□□□ 0.83
RAB11FIP4Q86YS3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.22■□□□□ 0.83
RAB11FIP4Q86YS3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
RAB11FIP4Q86YS3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
RAB11FIP4Q86YS3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RAB11FIP4Q86YS3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB11FIP4Q86YS3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB11FIP4Q86YS3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAB11FIP4Q86YS3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAB11FIP4Q86YS3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB11FIP4Q86YS3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB11FIP4Q86YS3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RAB11FIP4Q86YS3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB11FIP4Q86YS3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
RAB11FIP4Q86YS3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RAB11FIP4Q86YS3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB11FIP4Q86YS3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RAB11FIP4Q86YS3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB11FIP4Q86YS3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB11FIP4Q86YS3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB11FIP4Q86YS3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.21■□□□□ 0.83
RAB11FIP4Q86YS3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.21■□□□□ 0.83
RAB11FIP4Q86YS3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.21■□□□□ 0.83
RAB11FIP4Q86YS3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.21■□□□□ 0.83
RAB11FIP4Q86YS3 RNPS1P1-201ENST00000507437 918 ntBASIC20.21■□□□□ 0.83
RAB11FIP4Q86YS3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms