Protein–RNA interactions for Protein: Q86UP0

CDH24, Cadherin-24, humanhuman

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH24Q86UP0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH24Q86UP0 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH24Q86UP0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
CDH24Q86UP0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH24Q86UP0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.9■□□□□ 0.14
CDH24Q86UP0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.9■□□□□ 0.14
CDH24Q86UP0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH24Q86UP0 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH24Q86UP0 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH24Q86UP0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH24Q86UP0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.9■□□□□ 0.14
CDH24Q86UP0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH24Q86UP0 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH24Q86UP0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH24Q86UP0 AL592071.1-201ENST00000611956 408 ntBASIC15.9■□□□□ 0.14
CDH24Q86UP0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.9■□□□□ 0.14
CDH24Q86UP0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.9■□□□□ 0.14
CDH24Q86UP0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.9■□□□□ 0.14
CDH24Q86UP0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.9■□□□□ 0.14
CDH24Q86UP0 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH24Q86UP0 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH24Q86UP0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH24Q86UP0 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
CDH24Q86UP0 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH24Q86UP0 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH24Q86UP0 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH24Q86UP0 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH24Q86UP0 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
CDH24Q86UP0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH24Q86UP0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH24Q86UP0 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH24Q86UP0 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH24Q86UP0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH24Q86UP0 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH24Q86UP0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH24Q86UP0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH24Q86UP0 AC093677.2-201ENST00000600169 1863 ntBASIC15.89■□□□□ 0.13
CDH24Q86UP0 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH24Q86UP0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH24Q86UP0 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CDH24Q86UP0 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH24Q86UP0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH24Q86UP0 MINOS1P3-201ENST00000457048 203 ntBASIC15.89■□□□□ 0.13
CDH24Q86UP0 RPL13AP23-201ENST00000480739 586 ntBASIC15.89■□□□□ 0.13
CDH24Q86UP0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.89■□□□□ 0.13
CDH24Q86UP0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.89■□□□□ 0.13
CDH24Q86UP0 AC140113.2-201ENST00000604370 208 ntBASIC15.89■□□□□ 0.13
CDH24Q86UP0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CDH24Q86UP0 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH24Q86UP0 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH24Q86UP0 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH24Q86UP0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH24Q86UP0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH24Q86UP0 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH24Q86UP0 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH24Q86UP0 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CDH24Q86UP0 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH24Q86UP0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH24Q86UP0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH24Q86UP0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH24Q86UP0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH24Q86UP0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH24Q86UP0 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH24Q86UP0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH24Q86UP0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH24Q86UP0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.88■□□□□ 0.13
CDH24Q86UP0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CDH24Q86UP0 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CDH24Q86UP0 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH24Q86UP0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH24Q86UP0 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH24Q86UP0 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CDH24Q86UP0 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH24Q86UP0 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH24Q86UP0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH24Q86UP0 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH24Q86UP0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH24Q86UP0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH24Q86UP0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH24Q86UP0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH24Q86UP0 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.88■□□□□ 0.13
CDH24Q86UP0 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CDH24Q86UP0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.88■□□□□ 0.13
CDH24Q86UP0 GUSBP12-201ENST00000513727 720 ntBASIC15.88■□□□□ 0.13
CDH24Q86UP0 KRT18P41-201ENST00000518924 1277 ntBASIC15.88■□□□□ 0.13
CDH24Q86UP0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH24Q86UP0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.88■□□□□ 0.13
CDH24Q86UP0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH24Q86UP0 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH24Q86UP0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.88■□□□□ 0.13
CDH24Q86UP0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH24Q86UP0 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
CDH24Q86UP0 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CDH24Q86UP0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH24Q86UP0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CDH24Q86UP0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH24Q86UP0 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CDH24Q86UP0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH24Q86UP0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CDH24Q86UP0 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms