Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HERC4Q5GLZ8 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HERC4Q5GLZ8 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.29■□□□□ 0.68
HERC4Q5GLZ8 AP001094.4-201ENST00000579008 2176 ntBASIC19.29■□□□□ 0.68
HERC4Q5GLZ8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HERC4Q5GLZ8 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.28■□□□□ 0.68
HERC4Q5GLZ8 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
HERC4Q5GLZ8 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
HERC4Q5GLZ8 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
HERC4Q5GLZ8 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
HERC4Q5GLZ8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
HERC4Q5GLZ8 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HERC4Q5GLZ8 AC116353.5-201ENST00000638148 1699 ntBASIC19.27■□□□□ 0.68
HERC4Q5GLZ8 AP005117.1-201ENST00000584346 1413 ntBASIC19.27■□□□□ 0.68
HERC4Q5GLZ8 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
HERC4Q5GLZ8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HERC4Q5GLZ8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HERC4Q5GLZ8 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HERC4Q5GLZ8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HERC4Q5GLZ8 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HERC4Q5GLZ8 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.27■□□□□ 0.68
HERC4Q5GLZ8 AC098831.1-202ENST00000438821 336 ntBASIC19.27■□□□□ 0.68
HERC4Q5GLZ8 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.27■□□□□ 0.68
HERC4Q5GLZ8 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.27■□□□□ 0.68
HERC4Q5GLZ8 PGAM5P1-201ENST00000518923 814 ntBASIC19.27■□□□□ 0.68
HERC4Q5GLZ8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.27■□□□□ 0.68
HERC4Q5GLZ8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.27■□□□□ 0.68
HERC4Q5GLZ8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
HERC4Q5GLZ8 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HERC4Q5GLZ8 AP001160.2-201ENST00000596071 487 ntBASIC19.27■□□□□ 0.68
HERC4Q5GLZ8 AP001269.4-201ENST00000609611 512 ntBASIC19.27■□□□□ 0.68
HERC4Q5GLZ8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.27■□□□□ 0.68
HERC4Q5GLZ8 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.27■□□□□ 0.68
HERC4Q5GLZ8 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.27■□□□□ 0.68
HERC4Q5GLZ8 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HERC4Q5GLZ8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.27■□□□□ 0.67
HERC4Q5GLZ8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.27■□□□□ 0.67
HERC4Q5GLZ8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
HERC4Q5GLZ8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.27■□□□□ 0.67
HERC4Q5GLZ8 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
HERC4Q5GLZ8 AL135999.2-201ENST00000622438 1686 ntBASIC19.27■□□□□ 0.67
HERC4Q5GLZ8 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HERC4Q5GLZ8 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HERC4Q5GLZ8 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HERC4Q5GLZ8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HERC4Q5GLZ8 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
HERC4Q5GLZ8 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HERC4Q5GLZ8 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HERC4Q5GLZ8 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HERC4Q5GLZ8 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HERC4Q5GLZ8 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.26■□□□□ 0.67
HERC4Q5GLZ8 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HERC4Q5GLZ8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.26■□□□□ 0.67
HERC4Q5GLZ8 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HERC4Q5GLZ8 UPF3AP3-201ENST00000420996 769 ntBASIC19.26■□□□□ 0.67
HERC4Q5GLZ8 AL020989.1-201ENST00000422979 469 ntBASIC19.26■□□□□ 0.67
HERC4Q5GLZ8 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HERC4Q5GLZ8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.26■□□□□ 0.67
HERC4Q5GLZ8 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.26■□□□□ 0.67
HERC4Q5GLZ8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
HERC4Q5GLZ8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.26■□□□□ 0.67
HERC4Q5GLZ8 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HERC4Q5GLZ8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HERC4Q5GLZ8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HERC4Q5GLZ8 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HERC4Q5GLZ8 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HERC4Q5GLZ8 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HERC4Q5GLZ8 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms