Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
USH1GQ495M9 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.75■□□□□ 0.75
USH1GQ495M9 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.75■□□□□ 0.75
USH1GQ495M9 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.75■□□□□ 0.75
USH1GQ495M9 AC112482.1-201ENST00000492080 688 ntBASIC19.75■□□□□ 0.75
USH1GQ495M9 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.75■□□□□ 0.75
USH1GQ495M9 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.75■□□□□ 0.75
USH1GQ495M9 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.75■□□□□ 0.75
USH1GQ495M9 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.75■□□□□ 0.75
USH1GQ495M9 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
USH1GQ495M9 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
USH1GQ495M9 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.75■□□□□ 0.75
USH1GQ495M9 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
USH1GQ495M9 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
USH1GQ495M9 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
USH1GQ495M9 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
USH1GQ495M9 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.75■□□□□ 0.75
USH1GQ495M9 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
USH1GQ495M9 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.74■□□□□ 0.75
USH1GQ495M9 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
USH1GQ495M9 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USH1GQ495M9 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USH1GQ495M9 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
USH1GQ495M9 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
USH1GQ495M9 AC002310.6-201ENST00000624451 1377 ntBASIC19.74■□□□□ 0.75
USH1GQ495M9 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
USH1GQ495M9 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USH1GQ495M9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
USH1GQ495M9 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USH1GQ495M9 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.74■□□□□ 0.75
USH1GQ495M9 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USH1GQ495M9 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.74■□□□□ 0.75
USH1GQ495M9 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.74■□□□□ 0.75
USH1GQ495M9 DNAJB3-201ENST00000446806 729 ntBASIC19.74■□□□□ 0.75
USH1GQ495M9 PAWRP1-201ENST00000451083 565 ntBASIC19.74■□□□□ 0.75
USH1GQ495M9 SLC25A6P2-201ENST00000497974 877 ntBASIC19.74■□□□□ 0.75
USH1GQ495M9 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
USH1GQ495M9 MIR3687-2-201ENST00000577708 61 ntBASIC19.74■□□□□ 0.75
USH1GQ495M9 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.74■□□□□ 0.75
USH1GQ495M9 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USH1GQ495M9 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.74■□□□□ 0.75
USH1GQ495M9 MIR3687-1-201ENST00000614492 61 ntBASIC19.74■□□□□ 0.75
USH1GQ495M9 AC004877.2-201ENST00000623941 599 ntBASIC19.74■□□□□ 0.75
USH1GQ495M9 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USH1GQ495M9 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.74■□□□□ 0.75
USH1GQ495M9 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.74■□□□□ 0.75
USH1GQ495M9 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.74■□□□□ 0.75
USH1GQ495M9 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.74■□□□□ 0.75
USH1GQ495M9 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
USH1GQ495M9 BCAR1-209ENST00000546196 1340 ntBASIC19.74■□□□□ 0.75
USH1GQ495M9 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USH1GQ495M9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USH1GQ495M9 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
USH1GQ495M9 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.74■□□□□ 0.75
USH1GQ495M9 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USH1GQ495M9 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.73■□□□□ 0.75
USH1GQ495M9 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
USH1GQ495M9 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USH1GQ495M9 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USH1GQ495M9 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
USH1GQ495M9 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
USH1GQ495M9 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
USH1GQ495M9 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
USH1GQ495M9 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
USH1GQ495M9 AC087163.2-201ENST00000457299 853 ntBASIC19.73■□□□□ 0.75
USH1GQ495M9 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.73■□□□□ 0.75
USH1GQ495M9 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.73■□□□□ 0.75
USH1GQ495M9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
USH1GQ495M9 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
USH1GQ495M9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
USH1GQ495M9 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
USH1GQ495M9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
USH1GQ495M9 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USH1GQ495M9 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.73■□□□□ 0.75
USH1GQ495M9 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
USH1GQ495M9 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USH1GQ495M9 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USH1GQ495M9 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
USH1GQ495M9 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.72■□□□□ 0.75
USH1GQ495M9 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USH1GQ495M9 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USH1GQ495M9 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USH1GQ495M9 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USH1GQ495M9 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USH1GQ495M9 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USH1GQ495M9 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USH1GQ495M9 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USH1GQ495M9 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
USH1GQ495M9 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.72■□□□□ 0.75
USH1GQ495M9 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.72■□□□□ 0.75
USH1GQ495M9 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.72■□□□□ 0.75
USH1GQ495M9 AC096734.2-201ENST00000562054 433 ntBASIC19.72■□□□□ 0.75
USH1GQ495M9 MTDHP5-201ENST00000598980 586 ntBASIC19.72■□□□□ 0.75
USH1GQ495M9 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USH1GQ495M9 AL691403.2-201ENST00000618460 490 ntBASIC19.72■□□□□ 0.75
USH1GQ495M9 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USH1GQ495M9 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
USH1GQ495M9 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
USH1GQ495M9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
USH1GQ495M9 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms