Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 AC027612.4-201ENST00000605371 583 ntBASIC20.53■□□□□ 0.88
PDS5AQ29RF7 AL596442.2-201ENST00000610240 980 ntBASIC20.53■□□□□ 0.88
PDS5AQ29RF7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDS5AQ29RF7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PDS5AQ29RF7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDS5AQ29RF7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PDS5AQ29RF7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PDS5AQ29RF7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.52■□□□□ 0.88
PDS5AQ29RF7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PDS5AQ29RF7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PDS5AQ29RF7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PDS5AQ29RF7 AC018470.1-201ENST00000624790 3129 ntBASIC20.52■□□□□ 0.88
PDS5AQ29RF7 SLC22A20-204ENST00000530038 1673 ntBASIC20.52■□□□□ 0.87
PDS5AQ29RF7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PDS5AQ29RF7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PDS5AQ29RF7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PDS5AQ29RF7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC20.52■□□□□ 0.87
PDS5AQ29RF7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.52■□□□□ 0.87
PDS5AQ29RF7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PDS5AQ29RF7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.52■□□□□ 0.87
PDS5AQ29RF7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.87
PDS5AQ29RF7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
PDS5AQ29RF7 AC012569.1-201ENST00000591191 1524 ntBASIC20.52■□□□□ 0.87
PDS5AQ29RF7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PDS5AQ29RF7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PDS5AQ29RF7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.51■□□□□ 0.87
PDS5AQ29RF7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDS5AQ29RF7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.51■□□□□ 0.87
PDS5AQ29RF7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDS5AQ29RF7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PDS5AQ29RF7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PDS5AQ29RF7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDS5AQ29RF7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.51■□□□□ 0.87
PDS5AQ29RF7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.51■□□□□ 0.87
PDS5AQ29RF7 AC068880.1-201ENST00000507289 2297 ntBASIC20.51■□□□□ 0.87
PDS5AQ29RF7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDS5AQ29RF7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDS5AQ29RF7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDS5AQ29RF7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.51■□□□□ 0.87
PDS5AQ29RF7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.51■□□□□ 0.87
PDS5AQ29RF7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDS5AQ29RF7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.51■□□□□ 0.87
PDS5AQ29RF7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
PDS5AQ29RF7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20.51■□□□□ 0.87
PDS5AQ29RF7 AC022145.2-201ENST00000598203 171 ntBASIC20.51■□□□□ 0.87
PDS5AQ29RF7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDS5AQ29RF7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.51■□□□□ 0.87
PDS5AQ29RF7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDS5AQ29RF7 LINC02012-201ENST00000608206 1725 ntBASIC20.51■□□□□ 0.87
PDS5AQ29RF7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
PDS5AQ29RF7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDS5AQ29RF7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDS5AQ29RF7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDS5AQ29RF7 AL133373.2-201ENST00000623187 2828 ntBASIC20.5■□□□□ 0.87
PDS5AQ29RF7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC20.5■□□□□ 0.87
PDS5AQ29RF7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDS5AQ29RF7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDS5AQ29RF7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.5■□□□□ 0.87
PDS5AQ29RF7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDS5AQ29RF7 KRT8P49-201ENST00000604166 1432 ntBASIC20.5■□□□□ 0.87
PDS5AQ29RF7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.5■□□□□ 0.87
PDS5AQ29RF7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.5■□□□□ 0.87
PDS5AQ29RF7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDS5AQ29RF7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.5■□□□□ 0.87
PDS5AQ29RF7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC20.5■□□□□ 0.87
PDS5AQ29RF7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PDS5AQ29RF7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PDS5AQ29RF7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PDS5AQ29RF7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC20.5■□□□□ 0.87
PDS5AQ29RF7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDS5AQ29RF7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDS5AQ29RF7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PDS5AQ29RF7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDS5AQ29RF7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDS5AQ29RF7 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDS5AQ29RF7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.49■□□□□ 0.87
PDS5AQ29RF7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDS5AQ29RF7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDS5AQ29RF7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDS5AQ29RF7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDS5AQ29RF7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.49■□□□□ 0.87
PDS5AQ29RF7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PDS5AQ29RF7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDS5AQ29RF7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDS5AQ29RF7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDS5AQ29RF7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDS5AQ29RF7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms