Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
IRX4P78413 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
IRX4P78413 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IRX4P78413 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
IRX4P78413 AL355312.1-201ENST00000407115 2176 ntBASIC17.98■□□□□ 0.47
IRX4P78413 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IRX4P78413 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
IRX4P78413 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IRX4P78413 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IRX4P78413 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IRX4P78413 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.98■□□□□ 0.47
IRX4P78413 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IRX4P78413 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
IRX4P78413 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.98■□□□□ 0.47
IRX4P78413 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.98■□□□□ 0.47
IRX4P78413 AC104109.2-201ENST00000602919 1418 ntBASIC17.98■□□□□ 0.47
IRX4P78413 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
IRX4P78413 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
IRX4P78413 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.97■□□□□ 0.47
IRX4P78413 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
IRX4P78413 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
IRX4P78413 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.97■□□□□ 0.47
IRX4P78413 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.97■□□□□ 0.47
IRX4P78413 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
IRX4P78413 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.97■□□□□ 0.47
IRX4P78413 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
IRX4P78413 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
IRX4P78413 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
IRX4P78413 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.97■□□□□ 0.47
IRX4P78413 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
IRX4P78413 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.97■□□□□ 0.47
IRX4P78413 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
IRX4P78413 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
IRX4P78413 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
IRX4P78413 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.97■□□□□ 0.47
IRX4P78413 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
IRX4P78413 AC027601.4-201ENST00000611259 610 ntBASIC17.97■□□□□ 0.47
IRX4P78413 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
IRX4P78413 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
IRX4P78413 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.97■□□□□ 0.47
IRX4P78413 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
IRX4P78413 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
IRX4P78413 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
IRX4P78413 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
IRX4P78413 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IRX4P78413 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IRX4P78413 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
IRX4P78413 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
IRX4P78413 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
IRX4P78413 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.96■□□□□ 0.47
IRX4P78413 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.96■□□□□ 0.47
IRX4P78413 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IRX4P78413 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
IRX4P78413 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IRX4P78413 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.96■□□□□ 0.47
IRX4P78413 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
IRX4P78413 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IRX4P78413 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.96■□□□□ 0.47
IRX4P78413 UPF3AP3-201ENST00000420996 769 ntBASIC17.96■□□□□ 0.47
IRX4P78413 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.96■□□□□ 0.47
IRX4P78413 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.96■□□□□ 0.47
IRX4P78413 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.96■□□□□ 0.47
IRX4P78413 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.96■□□□□ 0.47
IRX4P78413 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.96■□□□□ 0.47
IRX4P78413 IGHV3-22-201ENST00000520721 359 ntBASIC17.96■□□□□ 0.47
IRX4P78413 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.96■□□□□ 0.47
IRX4P78413 AC005336.2-201ENST00000593183 939 ntBASIC17.96■□□□□ 0.47
IRX4P78413 AL356488.2-201ENST00000602755 427 ntBASIC17.96■□□□□ 0.47
IRX4P78413 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.96■□□□□ 0.47
IRX4P78413 AP001269.4-201ENST00000609611 512 ntBASIC17.96■□□□□ 0.47
IRX4P78413 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.96■□□□□ 0.47
IRX4P78413 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
IRX4P78413 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.96■□□□□ 0.47
IRX4P78413 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IRX4P78413 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
IRX4P78413 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
IRX4P78413 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
IRX4P78413 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IRX4P78413 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IRX4P78413 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
IRX4P78413 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.96■□□□□ 0.47
IRX4P78413 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
IRX4P78413 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
IRX4P78413 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
IRX4P78413 AC022211.2-201ENST00000585075 2527 ntBASIC17.96■□□□□ 0.47
IRX4P78413 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.96■□□□□ 0.46
IRX4P78413 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
IRX4P78413 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
IRX4P78413 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
IRX4P78413 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IRX4P78413 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IRX4P78413 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IRX4P78413 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IRX4P78413 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
IRX4P78413 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
IRX4P78413 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
IRX4P78413 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IRX4P78413 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IRX4P78413 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
IRX4P78413 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms