Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN8P56748 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN8P56748 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.41■□□□□ 0.22
CLDN8P56748 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
CLDN8P56748 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN8P56748 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CLDN8P56748 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN8P56748 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.41■□□□□ 0.22
CLDN8P56748 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.41■□□□□ 0.22
CLDN8P56748 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN8P56748 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.41■□□□□ 0.22
CLDN8P56748 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.41■□□□□ 0.22
CLDN8P56748 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.41■□□□□ 0.22
CLDN8P56748 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.41■□□□□ 0.22
CLDN8P56748 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN8P56748 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CLDN8P56748 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.41■□□□□ 0.22
CLDN8P56748 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CLDN8P56748 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.41■□□□□ 0.22
CLDN8P56748 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN8P56748 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
CLDN8P56748 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN8P56748 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.41■□□□□ 0.22
CLDN8P56748 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN8P56748 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN8P56748 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN8P56748 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN8P56748 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CLDN8P56748 AC233702.3-201ENST00000578656 1387 ntBASIC16.4■□□□□ 0.22
CLDN8P56748 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN8P56748 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CLDN8P56748 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN8P56748 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN8P56748 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN8P56748 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN8P56748 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN8P56748 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN8P56748 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN8P56748 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN8P56748 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN8P56748 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN8P56748 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN8P56748 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN8P56748 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN8P56748 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CLDN8P56748 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN8P56748 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.4■□□□□ 0.22
CLDN8P56748 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN8P56748 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
CLDN8P56748 FAM86EP-206ENST00000510506 987 ntBASIC16.4■□□□□ 0.22
CLDN8P56748 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.4■□□□□ 0.22
CLDN8P56748 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.4■□□□□ 0.22
CLDN8P56748 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.4■□□□□ 0.22
CLDN8P56748 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.4■□□□□ 0.22
CLDN8P56748 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CLDN8P56748 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN8P56748 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN8P56748 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN8P56748 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN8P56748 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CLDN8P56748 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN8P56748 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN8P56748 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN8P56748 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN8P56748 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
CLDN8P56748 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN8P56748 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CLDN8P56748 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CLDN8P56748 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN8P56748 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDN8P56748 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN8P56748 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN8P56748 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN8P56748 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN8P56748 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN8P56748 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
CLDN8P56748 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CLDN8P56748 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN8P56748 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
CLDN8P56748 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDN8P56748 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN8P56748 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CLDN8P56748 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CLDN8P56748 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CLDN8P56748 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN8P56748 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CLDN8P56748 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN8P56748 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CLDN8P56748 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDN8P56748 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDN8P56748 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN8P56748 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN8P56748 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN8P56748 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN8P56748 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN8P56748 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN8P56748 INTS4P1-201ENST00000438455 1935 ntBASIC16.39■□□□□ 0.21
CLDN8P56748 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN8P56748 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDN8P56748 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms