Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PEX3P56589 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PEX3P56589 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PEX3P56589 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.98■□□□□ 0.63
PEX3P56589 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.98■□□□□ 0.63
PEX3P56589 SLC25A1P1-201ENST00000528351 927 ntBASIC18.98■□□□□ 0.63
PEX3P56589 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PEX3P56589 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PEX3P56589 PGM5P2-202ENST00000637225 1043 ntBASIC18.98■□□□□ 0.63
PEX3P56589 AL805961.1-202ENST00000641562 540 ntBASIC18.98■□□□□ 0.63
PEX3P56589 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PEX3P56589 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PEX3P56589 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.98■□□□□ 0.63
PEX3P56589 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.98■□□□□ 0.63
PEX3P56589 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PEX3P56589 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.98■□□□□ 0.63
PEX3P56589 EGFEM1P-202ENST00000431685 1563 ntBASIC18.98■□□□□ 0.63
PEX3P56589 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PEX3P56589 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.97■□□□□ 0.63
PEX3P56589 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PEX3P56589 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PEX3P56589 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PEX3P56589 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PEX3P56589 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PEX3P56589 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PEX3P56589 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
PEX3P56589 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PEX3P56589 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PEX3P56589 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PEX3P56589 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PEX3P56589 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PEX3P56589 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PEX3P56589 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PEX3P56589 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PEX3P56589 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.97■□□□□ 0.63
PEX3P56589 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.97■□□□□ 0.63
PEX3P56589 RNA5SP415-201ENST00000517246 115 ntBASIC18.97■□□□□ 0.63
PEX3P56589 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PEX3P56589 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.97■□□□□ 0.63
PEX3P56589 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
PEX3P56589 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.97■□□□□ 0.63
PEX3P56589 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.97■□□□□ 0.63
PEX3P56589 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PEX3P56589 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
PEX3P56589 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.97■□□□□ 0.63
PEX3P56589 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PEX3P56589 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PEX3P56589 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PEX3P56589 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.96■□□□□ 0.63
PEX3P56589 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PEX3P56589 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.96■□□□□ 0.63
PEX3P56589 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PEX3P56589 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.96■□□□□ 0.63
PEX3P56589 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PEX3P56589 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.96■□□□□ 0.63
PEX3P56589 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.96■□□□□ 0.63
PEX3P56589 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PEX3P56589 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PEX3P56589 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.96■□□□□ 0.63
PEX3P56589 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PEX3P56589 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.96■□□□□ 0.63
PEX3P56589 AP002414.1-201ENST00000391405 1147 ntBASIC18.96■□□□□ 0.63
PEX3P56589 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.96■□□□□ 0.63
PEX3P56589 RPL13AP23-201ENST00000480739 586 ntBASIC18.96■□□□□ 0.63
PEX3P56589 UNC93B6-202ENST00000528242 690 ntBASIC18.96■□□□□ 0.63
PEX3P56589 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.96■□□□□ 0.63
PEX3P56589 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.96■□□□□ 0.63
PEX3P56589 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PEX3P56589 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.96■□□□□ 0.63
PEX3P56589 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PEX3P56589 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.96■□□□□ 0.63
PEX3P56589 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.96■□□□□ 0.63
PEX3P56589 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PEX3P56589 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PEX3P56589 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.96■□□□□ 0.63
PEX3P56589 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PEX3P56589 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PEX3P56589 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.96■□□□□ 0.63
PEX3P56589 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PEX3P56589 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PEX3P56589 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.96■□□□□ 0.63
PEX3P56589 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PEX3P56589 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PEX3P56589 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PEX3P56589 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.95■□□□□ 0.62
PEX3P56589 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PEX3P56589 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PEX3P56589 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PEX3P56589 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PEX3P56589 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PEX3P56589 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PEX3P56589 PI4KAP1-204ENST00000612579 1703 ntBASIC18.95■□□□□ 0.62
PEX3P56589 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PEX3P56589 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PEX3P56589 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
PEX3P56589 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PEX3P56589 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PEX3P56589 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.95■□□□□ 0.62
PEX3P56589 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.95■□□□□ 0.62
PEX3P56589 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms