Protein–RNA interactions for Protein: P54852

EMP3, Epithelial membrane protein 3, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3P54852 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EMP3P54852 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.84■□□□□ 0.29
EMP3P54852 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
EMP3P54852 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EMP3P54852 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
EMP3P54852 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
EMP3P54852 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.29
EMP3P54852 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
EMP3P54852 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.83■□□□□ 0.29
EMP3P54852 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
EMP3P54852 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
EMP3P54852 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
EMP3P54852 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EMP3P54852 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EMP3P54852 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EMP3P54852 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EMP3P54852 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EMP3P54852 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.83■□□□□ 0.28
EMP3P54852 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.83■□□□□ 0.28
EMP3P54852 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EMP3P54852 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EMP3P54852 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EMP3P54852 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EMP3P54852 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.83■□□□□ 0.28
EMP3P54852 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.83■□□□□ 0.28
EMP3P54852 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.83■□□□□ 0.28
EMP3P54852 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.83■□□□□ 0.28
EMP3P54852 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.83■□□□□ 0.28
EMP3P54852 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.83■□□□□ 0.28
EMP3P54852 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.83■□□□□ 0.28
EMP3P54852 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EMP3P54852 LINC02199-201ENST00000506655 2702 ntBASIC16.83■□□□□ 0.28
EMP3P54852 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.83■□□□□ 0.28
EMP3P54852 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.83■□□□□ 0.28
EMP3P54852 AC115989.2-201ENST00000578640 563 ntBASIC16.83■□□□□ 0.28
EMP3P54852 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EMP3P54852 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.83■□□□□ 0.28
EMP3P54852 AL355816.2-201ENST00000610049 647 ntBASIC16.83■□□□□ 0.28
EMP3P54852 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.83■□□□□ 0.28
EMP3P54852 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.83■□□□□ 0.28
EMP3P54852 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
EMP3P54852 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
EMP3P54852 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
EMP3P54852 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.83■□□□□ 0.28
EMP3P54852 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.82■□□□□ 0.28
EMP3P54852 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
EMP3P54852 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EMP3P54852 AC105020.1-201ENST00000435356 2205 ntBASIC16.82■□□□□ 0.28
EMP3P54852 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.82■□□□□ 0.28
EMP3P54852 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EMP3P54852 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
EMP3P54852 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EMP3P54852 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.82■□□□□ 0.28
EMP3P54852 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EMP3P54852 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EMP3P54852 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EMP3P54852 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EMP3P54852 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EMP3P54852 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EMP3P54852 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.82■□□□□ 0.28
EMP3P54852 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EMP3P54852 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EMP3P54852 AKR1C7P-201ENST00000305623 895 ntBASIC16.82■□□□□ 0.28
EMP3P54852 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EMP3P54852 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.82■□□□□ 0.28
EMP3P54852 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
EMP3P54852 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.82■□□□□ 0.28
EMP3P54852 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.82■□□□□ 0.28
EMP3P54852 EMBP1-201ENST00000458200 901 ntBASIC16.82■□□□□ 0.28
EMP3P54852 RPL12P24-201ENST00000474907 486 ntBASIC16.82■□□□□ 0.28
EMP3P54852 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC16.82■□□□□ 0.28
EMP3P54852 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
EMP3P54852 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC16.82■□□□□ 0.28
EMP3P54852 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.82■□□□□ 0.28
EMP3P54852 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EMP3P54852 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.82■□□□□ 0.28
EMP3P54852 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EMP3P54852 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EMP3P54852 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
EMP3P54852 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EMP3P54852 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EMP3P54852 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
EMP3P54852 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
EMP3P54852 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.82■□□□□ 0.28
EMP3P54852 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EMP3P54852 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
EMP3P54852 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.82■□□□□ 0.28
EMP3P54852 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.82■□□□□ 0.28
EMP3P54852 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
EMP3P54852 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
EMP3P54852 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.81■□□□□ 0.28
EMP3P54852 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EMP3P54852 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EMP3P54852 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EMP3P54852 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
EMP3P54852 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EMP3P54852 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EMP3P54852 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.81■□□□□ 0.28
EMP3P54852 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.81■□□□□ 0.28
EMP3P54852 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms