Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ATP1B3P54709 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ATP1B3P54709 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ATP1B3P54709 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.02□□□□□ -0.01
ATP1B3P54709 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
ATP1B3P54709 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
ATP1B3P54709 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ATP1B3P54709 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.01□□□□□ -0.01
ATP1B3P54709 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.01□□□□□ -0.01
ATP1B3P54709 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATP1B3P54709 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.01□□□□□ -0.01
ATP1B3P54709 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATP1B3P54709 AGGF1P2-201ENST00000426656 2106 ntBASIC15.01□□□□□ -0.01
ATP1B3P54709 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ATP1B3P54709 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.01□□□□□ -0.01
ATP1B3P54709 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
ATP1B3P54709 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATP1B3P54709 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATP1B3P54709 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.01□□□□□ -0.01
ATP1B3P54709 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATP1B3P54709 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ATP1B3P54709 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ATP1B3P54709 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATP1B3P54709 TSPY22P-201ENST00000427496 604 ntBASIC15.01□□□□□ -0.01
ATP1B3P54709 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.01□□□□□ -0.01
ATP1B3P54709 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATP1B3P54709 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.01□□□□□ -0.01
ATP1B3P54709 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ATP1B3P54709 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.01□□□□□ -0.01
ATP1B3P54709 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
ATP1B3P54709 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATP1B3P54709 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
ATP1B3P54709 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
ATP1B3P54709 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATP1B3P54709 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ATP1B3P54709 AC010460.3-201ENST00000511359 1579 ntBASIC15.01□□□□□ -0.01
ATP1B3P54709 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATP1B3P54709 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.01□□□□□ -0.01
ATP1B3P54709 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATP1B3P54709 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATP1B3P54709 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
ATP1B3P54709 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATP1B3P54709 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15□□□□□ -0.01
ATP1B3P54709 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
ATP1B3P54709 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15□□□□□ -0.01
ATP1B3P54709 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
ATP1B3P54709 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ATP1B3P54709 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15□□□□□ -0.01
ATP1B3P54709 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15□□□□□ -0.01
ATP1B3P54709 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ATP1B3P54709 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ATP1B3P54709 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15□□□□□ -0.01
ATP1B3P54709 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ATP1B3P54709 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15□□□□□ -0.01
ATP1B3P54709 AC124864.1-201ENST00000623408 392 ntBASIC15□□□□□ -0.01
ATP1B3P54709 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15□□□□□ -0.01
ATP1B3P54709 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15□□□□□ -0.01
ATP1B3P54709 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ATP1B3P54709 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15□□□□□ -0.01
ATP1B3P54709 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
ATP1B3P54709 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
ATP1B3P54709 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
ATP1B3P54709 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15□□□□□ -0.01
ATP1B3P54709 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15□□□□□ -0.01
ATP1B3P54709 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
ATP1B3P54709 AL596257.1-201ENST00000641463 2694 ntBASIC15□□□□□ -0.01
ATP1B3P54709 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.99□□□□□ -0.01
ATP1B3P54709 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
ATP1B3P54709 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.99□□□□□ -0.01
ATP1B3P54709 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
ATP1B3P54709 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.99□□□□□ -0.01
ATP1B3P54709 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ATP1B3P54709 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ATP1B3P54709 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
ATP1B3P54709 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATP1B3P54709 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.99□□□□□ -0.01
ATP1B3P54709 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATP1B3P54709 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
ATP1B3P54709 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATP1B3P54709 FLJ38576-201ENST00000623820 2459 ntBASIC14.99□□□□□ -0.01
ATP1B3P54709 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATP1B3P54709 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.99□□□□□ -0.01
ATP1B3P54709 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.99□□□□□ -0.01
ATP1B3P54709 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATP1B3P54709 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
ATP1B3P54709 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATP1B3P54709 SPDYE13P-201ENST00000445314 798 ntBASIC14.99□□□□□ -0.01
ATP1B3P54709 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.99□□□□□ -0.01
ATP1B3P54709 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.99□□□□□ -0.01
ATP1B3P54709 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATP1B3P54709 AC011840.4-201ENST00000578471 627 ntBASIC14.99□□□□□ -0.01
ATP1B3P54709 AC090616.6-201ENST00000582640 721 ntBASIC14.99□□□□□ -0.01
ATP1B3P54709 IGHV3-41-201ENST00000613121 348 ntBASIC14.99□□□□□ -0.01
ATP1B3P54709 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.99□□□□□ -0.01
ATP1B3P54709 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.99□□□□□ -0.01
ATP1B3P54709 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
ATP1B3P54709 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATP1B3P54709 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATP1B3P54709 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
ATP1B3P54709 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms