Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLCN3P51790 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLCN3P51790 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLCN3P51790 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLCN3P51790 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.87■□□□□ 0.61
CLCN3P51790 SLC25A1P3-201ENST00000395415 828 ntBASIC18.87■□□□□ 0.61
CLCN3P51790 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.87■□□□□ 0.61
CLCN3P51790 FAM58CP-201ENST00000435741 640 ntBASIC18.87■□□□□ 0.61
CLCN3P51790 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.87■□□□□ 0.61
CLCN3P51790 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLCN3P51790 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLCN3P51790 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.87■□□□□ 0.61
CLCN3P51790 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CLCN3P51790 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.87■□□□□ 0.61
CLCN3P51790 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.87■□□□□ 0.61
CLCN3P51790 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.87■□□□□ 0.61
CLCN3P51790 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.87■□□□□ 0.61
CLCN3P51790 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CLCN3P51790 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CLCN3P51790 AC092919.2-201ENST00000623631 1645 ntBASIC18.87■□□□□ 0.61
CLCN3P51790 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLCN3P51790 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLCN3P51790 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.87■□□□□ 0.61
CLCN3P51790 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCN3P51790 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCN3P51790 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLCN3P51790 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.86■□□□□ 0.61
CLCN3P51790 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CLCN3P51790 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.86■□□□□ 0.61
CLCN3P51790 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCN3P51790 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCN3P51790 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCN3P51790 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCN3P51790 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCN3P51790 AC129492.6-201ENST00000611383 1305 ntBASIC18.86■□□□□ 0.61
CLCN3P51790 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.86■□□□□ 0.61
CLCN3P51790 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
CLCN3P51790 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLCN3P51790 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCN3P51790 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCN3P51790 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.86■□□□□ 0.61
CLCN3P51790 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.86■□□□□ 0.61
CLCN3P51790 AP006288.1-201ENST00000446065 395 ntBASIC18.86■□□□□ 0.61
CLCN3P51790 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.86■□□□□ 0.61
CLCN3P51790 AL031432.2-201ENST00000566714 459 ntBASIC18.86■□□□□ 0.61
CLCN3P51790 AL928711.1-201ENST00000570165 459 ntBASIC18.86■□□□□ 0.61
CLCN3P51790 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.86■□□□□ 0.61
CLCN3P51790 AC091812.2-201ENST00000619081 385 ntBASIC18.86■□□□□ 0.61
CLCN3P51790 AC079781.4-201ENST00000641908 219 ntBASIC18.86■□□□□ 0.61
CLCN3P51790 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
CLCN3P51790 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
CLCN3P51790 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.86■□□□□ 0.61
CLCN3P51790 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCN3P51790 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCN3P51790 ELL2P1-201ENST00000413990 1906 ntBASIC18.86■□□□□ 0.61
CLCN3P51790 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.86■□□□□ 0.61
CLCN3P51790 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CLCN3P51790 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CLCN3P51790 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLCN3P51790 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLCN3P51790 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLCN3P51790 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLCN3P51790 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLCN3P51790 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLCN3P51790 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.85■□□□□ 0.61
CLCN3P51790 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLCN3P51790 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLCN3P51790 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.85■□□□□ 0.61
CLCN3P51790 MKNK2P1-201ENST00000437526 628 ntBASIC18.85■□□□□ 0.61
CLCN3P51790 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.85■□□□□ 0.61
CLCN3P51790 CEND1P1-201ENST00000451006 455 ntBASIC18.85■□□□□ 0.61
CLCN3P51790 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.85■□□□□ 0.61
CLCN3P51790 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CLCN3P51790 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLCN3P51790 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.85■□□□□ 0.61
CLCN3P51790 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.85■□□□□ 0.61
CLCN3P51790 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.85■□□□□ 0.61
CLCN3P51790 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLCN3P51790 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.85■□□□□ 0.61
CLCN3P51790 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CLCN3P51790 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLCN3P51790 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.85■□□□□ 0.61
CLCN3P51790 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLCN3P51790 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.85■□□□□ 0.61
CLCN3P51790 EGFEM1P-202ENST00000431685 1563 ntBASIC18.85■□□□□ 0.61
CLCN3P51790 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLCN3P51790 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLCN3P51790 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CLCN3P51790 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLCN3P51790 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CLCN3P51790 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.84■□□□□ 0.61
CLCN3P51790 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCN3P51790 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.84■□□□□ 0.61
CLCN3P51790 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLCN3P51790 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.84■□□□□ 0.61
CLCN3P51790 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.84■□□□□ 0.61
CLCN3P51790 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLCN3P51790 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCN3P51790 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLCN3P51790 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms