Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CIITAP33076 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CIITAP33076 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CIITAP33076 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CIITAP33076 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CIITAP33076 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CIITAP33076 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CIITAP33076 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CIITAP33076 KRT18P2-201ENST00000447938 1258 ntBASIC19.35■□□□□ 0.69
CIITAP33076 PGAM5P1-201ENST00000518923 814 ntBASIC19.35■□□□□ 0.69
CIITAP33076 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.35■□□□□ 0.69
CIITAP33076 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.35■□□□□ 0.69
CIITAP33076 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.35■□□□□ 0.69
CIITAP33076 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.35■□□□□ 0.69
CIITAP33076 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CIITAP33076 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.35■□□□□ 0.69
CIITAP33076 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CIITAP33076 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
CIITAP33076 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CIITAP33076 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.35■□□□□ 0.69
CIITAP33076 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CIITAP33076 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.34■□□□□ 0.69
CIITAP33076 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CIITAP33076 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.34■□□□□ 0.69
CIITAP33076 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.34■□□□□ 0.69
CIITAP33076 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CIITAP33076 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CIITAP33076 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.34■□□□□ 0.69
CIITAP33076 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CIITAP33076 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CIITAP33076 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CIITAP33076 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.34■□□□□ 0.69
CIITAP33076 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CIITAP33076 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
CIITAP33076 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CIITAP33076 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.34■□□□□ 0.69
CIITAP33076 MED15P5-201ENST00000423150 992 ntBASIC19.34■□□□□ 0.69
CIITAP33076 KRT18P3-201ENST00000451602 1288 ntBASIC19.34■□□□□ 0.69
CIITAP33076 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
CIITAP33076 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CIITAP33076 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CIITAP33076 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CIITAP33076 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CIITAP33076 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CIITAP33076 AC108860.2-201ENST00000562760 2183 ntBASIC19.34■□□□□ 0.69
CIITAP33076 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CIITAP33076 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.34■□□□□ 0.69
CIITAP33076 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.34■□□□□ 0.69
CIITAP33076 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CIITAP33076 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CIITAP33076 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CIITAP33076 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CIITAP33076 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CIITAP33076 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CIITAP33076 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.34■□□□□ 0.69
CIITAP33076 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.34■□□□□ 0.69
CIITAP33076 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CIITAP33076 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CIITAP33076 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CIITAP33076 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CIITAP33076 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CIITAP33076 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CIITAP33076 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.33■□□□□ 0.69
CIITAP33076 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.33■□□□□ 0.69
CIITAP33076 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CIITAP33076 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CIITAP33076 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.33■□□□□ 0.68
CIITAP33076 AC007967.2-201ENST00000432613 625 ntBASIC19.33■□□□□ 0.68
CIITAP33076 FAM185BP-201ENST00000443595 716 ntBASIC19.33■□□□□ 0.68
CIITAP33076 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.33■□□□□ 0.68
CIITAP33076 POLD2P1-201ENST00000511220 997 ntBASIC19.33■□□□□ 0.68
CIITAP33076 AC107918.2-201ENST00000530817 355 ntBASIC19.33■□□□□ 0.68
CIITAP33076 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.33■□□□□ 0.68
CIITAP33076 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.33■□□□□ 0.68
CIITAP33076 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.33■□□□□ 0.68
CIITAP33076 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CIITAP33076 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CIITAP33076 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CIITAP33076 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CIITAP33076 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CIITAP33076 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CIITAP33076 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CIITAP33076 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CIITAP33076 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CIITAP33076 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CIITAP33076 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CIITAP33076 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CIITAP33076 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.32■□□□□ 0.68
CIITAP33076 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.32■□□□□ 0.68
CIITAP33076 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CIITAP33076 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CIITAP33076 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CIITAP33076 AC129492.6-201ENST00000611383 1305 ntBASIC19.32■□□□□ 0.68
CIITAP33076 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CIITAP33076 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CIITAP33076 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CIITAP33076 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.32■□□□□ 0.68
CIITAP33076 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CIITAP33076 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.32■□□□□ 0.68
CIITAP33076 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms