Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GAP43P17677 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19■□□□□ 0.63
GAP43P17677 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19■□□□□ 0.63
GAP43P17677 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
GAP43P17677 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
GAP43P17677 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.99■□□□□ 0.63
GAP43P17677 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GAP43P17677 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GAP43P17677 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GAP43P17677 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GAP43P17677 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GAP43P17677 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.99■□□□□ 0.63
GAP43P17677 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GAP43P17677 KRT18P67-201ENST00000432816 1264 ntBASIC18.99■□□□□ 0.63
GAP43P17677 AC079781.3-201ENST00000449110 356 ntBASIC18.99■□□□□ 0.63
GAP43P17677 AF186996.4-201ENST00000467186 377 ntBASIC18.99■□□□□ 0.63
GAP43P17677 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
GAP43P17677 OR7E14P-202ENST00000530490 1290 ntBASIC18.99■□□□□ 0.63
GAP43P17677 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.99■□□□□ 0.63
GAP43P17677 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.99■□□□□ 0.63
GAP43P17677 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.99■□□□□ 0.63
GAP43P17677 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
GAP43P17677 AL031008.1-201ENST00000619963 541 ntBASIC18.99■□□□□ 0.63
GAP43P17677 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GAP43P17677 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GAP43P17677 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.99■□□□□ 0.63
GAP43P17677 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
GAP43P17677 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.99■□□□□ 0.63
GAP43P17677 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GAP43P17677 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GAP43P17677 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GAP43P17677 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.98■□□□□ 0.63
GAP43P17677 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
GAP43P17677 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.98■□□□□ 0.63
GAP43P17677 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
GAP43P17677 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GAP43P17677 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.98■□□□□ 0.63
GAP43P17677 AP002414.1-201ENST00000391405 1147 ntBASIC18.98■□□□□ 0.63
GAP43P17677 AC018712.1-201ENST00000455767 687 ntBASIC18.98■□□□□ 0.63
GAP43P17677 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.98■□□□□ 0.63
GAP43P17677 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.98■□□□□ 0.63
GAP43P17677 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.98■□□□□ 0.63
GAP43P17677 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.98■□□□□ 0.63
GAP43P17677 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.98■□□□□ 0.63
GAP43P17677 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.98■□□□□ 0.63
GAP43P17677 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.98■□□□□ 0.63
GAP43P17677 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.98■□□□□ 0.63
GAP43P17677 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.98■□□□□ 0.63
GAP43P17677 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.98■□□□□ 0.63
GAP43P17677 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GAP43P17677 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.98■□□□□ 0.63
GAP43P17677 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
GAP43P17677 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
GAP43P17677 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
GAP43P17677 AC060834.1-201ENST00000443027 2032 ntBASIC18.98■□□□□ 0.63
GAP43P17677 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.98■□□□□ 0.63
GAP43P17677 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GAP43P17677 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
GAP43P17677 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
GAP43P17677 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.97■□□□□ 0.63
GAP43P17677 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GAP43P17677 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GAP43P17677 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GAP43P17677 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
GAP43P17677 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GAP43P17677 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GAP43P17677 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
GAP43P17677 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.97■□□□□ 0.63
GAP43P17677 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GAP43P17677 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.97■□□□□ 0.63
GAP43P17677 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GAP43P17677 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.97■□□□□ 0.63
GAP43P17677 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
GAP43P17677 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GAP43P17677 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GAP43P17677 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
GAP43P17677 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.97■□□□□ 0.63
GAP43P17677 RPS2P1-201ENST00000434010 821 ntBASIC18.97■□□□□ 0.63
GAP43P17677 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.97■□□□□ 0.63
GAP43P17677 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
GAP43P17677 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.97■□□□□ 0.63
GAP43P17677 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.97■□□□□ 0.63
GAP43P17677 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.97■□□□□ 0.63
GAP43P17677 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.97■□□□□ 0.63
GAP43P17677 AC104692.2-201ENST00000603054 253 ntBASIC18.97■□□□□ 0.63
GAP43P17677 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.97■□□□□ 0.63
GAP43P17677 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.97■□□□□ 0.63
GAP43P17677 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GAP43P17677 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GAP43P17677 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
GAP43P17677 PKD1P1-201ENST00000458669 6805 ntBASIC18.97■□□□□ 0.63
GAP43P17677 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
GAP43P17677 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
GAP43P17677 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
GAP43P17677 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
GAP43P17677 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GAP43P17677 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GAP43P17677 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.96■□□□□ 0.63
GAP43P17677 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
GAP43P17677 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms