Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.04■□□□□ 0.64
SMPD1P17405 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMPD1P17405 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMPD1P17405 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMPD1P17405 AC092474.2-201ENST00000424288 719 ntBASIC19.04■□□□□ 0.64
SMPD1P17405 SLC25A6P5-201ENST00000435663 894 ntBASIC19.04■□□□□ 0.64
SMPD1P17405 RBPMS2P1-201ENST00000437762 623 ntBASIC19.04■□□□□ 0.64
SMPD1P17405 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.04■□□□□ 0.64
SMPD1P17405 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SMPD1P17405 AC093214.1-201ENST00000511688 1107 ntBASIC19.04■□□□□ 0.64
SMPD1P17405 AC069262.1-201ENST00000539058 672 ntBASIC19.04■□□□□ 0.64
SMPD1P17405 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.04■□□□□ 0.64
SMPD1P17405 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.04■□□□□ 0.64
SMPD1P17405 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMPD1P17405 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMPD1P17405 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.04■□□□□ 0.64
SMPD1P17405 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.04■□□□□ 0.64
SMPD1P17405 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
SMPD1P17405 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMPD1P17405 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMPD1P17405 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.04■□□□□ 0.64
SMPD1P17405 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMPD1P17405 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMPD1P17405 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMPD1P17405 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
SMPD1P17405 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMPD1P17405 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMPD1P17405 AL353732.1-201ENST00000569618 1459 ntBASIC19.03■□□□□ 0.64
SMPD1P17405 TUBB3P1-201ENST00000405796 1332 ntBASIC19.03■□□□□ 0.64
SMPD1P17405 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
SMPD1P17405 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMPD1P17405 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMPD1P17405 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMPD1P17405 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMPD1P17405 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMPD1P17405 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.03■□□□□ 0.64
SMPD1P17405 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.03■□□□□ 0.64
SMPD1P17405 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SMPD1P17405 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMPD1P17405 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMPD1P17405 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.03■□□□□ 0.64
SMPD1P17405 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMPD1P17405 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMPD1P17405 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMPD1P17405 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.03■□□□□ 0.64
SMPD1P17405 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SMPD1P17405 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMPD1P17405 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.02■□□□□ 0.64
SMPD1P17405 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMPD1P17405 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMPD1P17405 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMPD1P17405 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMPD1P17405 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SMPD1P17405 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.02■□□□□ 0.64
SMPD1P17405 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMPD1P17405 AC055876.3-201ENST00000431496 288 ntBASIC19.02■□□□□ 0.64
SMPD1P17405 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.02■□□□□ 0.64
SMPD1P17405 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.02■□□□□ 0.64
SMPD1P17405 IGHV3-62-201ENST00000520057 340 ntBASIC19.02■□□□□ 0.64
SMPD1P17405 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.02■□□□□ 0.64
SMPD1P17405 AC109635.5-201ENST00000533593 962 ntBASIC19.02■□□□□ 0.64
SMPD1P17405 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.02■□□□□ 0.64
SMPD1P17405 AC138761.1-201ENST00000584393 385 ntBASIC19.02■□□□□ 0.64
SMPD1P17405 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMPD1P17405 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMPD1P17405 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMPD1P17405 AC138649.4-201ENST00000612222 287 ntBASIC19.02■□□□□ 0.64
SMPD1P17405 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.02■□□□□ 0.64
SMPD1P17405 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SMPD1P17405 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.63
SMPD1P17405 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.02■□□□□ 0.63
SMPD1P17405 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.02■□□□□ 0.63
SMPD1P17405 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SMPD1P17405 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.01■□□□□ 0.63
SMPD1P17405 SLC22A20-204ENST00000530038 1673 ntBASIC19.01■□□□□ 0.63
SMPD1P17405 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMPD1P17405 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMPD1P17405 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
SMPD1P17405 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.01■□□□□ 0.63
SMPD1P17405 RNF165-205ENST00000588679 2904 ntBASIC19.01■□□□□ 0.63
SMPD1P17405 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.01■□□□□ 0.63
SMPD1P17405 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMPD1P17405 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SMPD1P17405 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.01■□□□□ 0.63
SMPD1P17405 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SMPD1P17405 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.01■□□□□ 0.63
SMPD1P17405 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMPD1P17405 UXT-AS1-201ENST00000590504 1525 ntBASIC19.01■□□□□ 0.63
SMPD1P17405 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMPD1P17405 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.01■□□□□ 0.63
SMPD1P17405 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.01■□□□□ 0.63
SMPD1P17405 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.01■□□□□ 0.63
SMPD1P17405 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.01■□□□□ 0.63
SMPD1P17405 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.01■□□□□ 0.63
SMPD1P17405 RNA5SP421-201ENST00000516864 134 ntBASIC19.01■□□□□ 0.63
SMPD1P17405 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.01■□□□□ 0.63
SMPD1P17405 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.01■□□□□ 0.63
SMPD1P17405 AC026150.2-201ENST00000564693 1156 ntBASIC19.01■□□□□ 0.63
SMPD1P17405 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SMPD1P17405 AJ011932.1-201ENST00000621707 465 ntBASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms