Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MT-ND3P03897 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MT-ND3P03897 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
MT-ND3P03897 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.61■□□□□ 0.41
MT-ND3P03897 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
MT-ND3P03897 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
MT-ND3P03897 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MT-ND3P03897 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MT-ND3P03897 MIR662-201ENST00000384847 95 ntBASIC17.61■□□□□ 0.41
MT-ND3P03897 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MT-ND3P03897 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.61■□□□□ 0.41
MT-ND3P03897 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.61■□□□□ 0.41
MT-ND3P03897 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.61■□□□□ 0.41
MT-ND3P03897 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MT-ND3P03897 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.61■□□□□ 0.41
MT-ND3P03897 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.61■□□□□ 0.41
MT-ND3P03897 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
MT-ND3P03897 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.61■□□□□ 0.41
MT-ND3P03897 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
MT-ND3P03897 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.61■□□□□ 0.41
MT-ND3P03897 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MT-ND3P03897 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MT-ND3P03897 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.61■□□□□ 0.41
MT-ND3P03897 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.61■□□□□ 0.41
MT-ND3P03897 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
MT-ND3P03897 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.61■□□□□ 0.41
MT-ND3P03897 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MT-ND3P03897 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
MT-ND3P03897 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
MT-ND3P03897 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-ND3P03897 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.6■□□□□ 0.41
MT-ND3P03897 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
MT-ND3P03897 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-ND3P03897 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
MT-ND3P03897 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MT-ND3P03897 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-ND3P03897 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
MT-ND3P03897 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
MT-ND3P03897 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-ND3P03897 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-ND3P03897 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-ND3P03897 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.6■□□□□ 0.41
MT-ND3P03897 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MT-ND3P03897 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.6■□□□□ 0.41
MT-ND3P03897 AC112698.1-201ENST00000510299 916 ntBASIC17.6■□□□□ 0.41
MT-ND3P03897 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.6■□□□□ 0.41
MT-ND3P03897 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.6■□□□□ 0.41
MT-ND3P03897 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.6■□□□□ 0.41
MT-ND3P03897 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.6■□□□□ 0.41
MT-ND3P03897 AL139327.4-201ENST00000612362 153 ntBASIC17.6■□□□□ 0.41
MT-ND3P03897 AC092119.3-201ENST00000612618 583 ntBASIC17.6■□□□□ 0.41
MT-ND3P03897 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
MT-ND3P03897 AC009154.2-201ENST00000621177 724 ntBASIC17.6■□□□□ 0.41
MT-ND3P03897 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-ND3P03897 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.6■□□□□ 0.41
MT-ND3P03897 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-ND3P03897 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MT-ND3P03897 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-ND3P03897 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-ND3P03897 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-ND3P03897 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
MT-ND3P03897 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
MT-ND3P03897 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-ND3P03897 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-ND3P03897 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.59■□□□□ 0.41
MT-ND3P03897 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
MT-ND3P03897 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-ND3P03897 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
MT-ND3P03897 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
MT-ND3P03897 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.59■□□□□ 0.41
MT-ND3P03897 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.59■□□□□ 0.41
MT-ND3P03897 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-ND3P03897 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.59■□□□□ 0.41
MT-ND3P03897 AC016734.2-201ENST00000624325 1377 ntBASIC17.59■□□□□ 0.41
MT-ND3P03897 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-ND3P03897 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-ND3P03897 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MT-ND3P03897 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-ND3P03897 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MT-ND3P03897 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
MT-ND3P03897 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
MT-ND3P03897 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MT-ND3P03897 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.59■□□□□ 0.41
MT-ND3P03897 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MT-ND3P03897 PRELID1P1-202ENST00000567272 903 ntBASIC17.59■□□□□ 0.41
MT-ND3P03897 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
MT-ND3P03897 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.59■□□□□ 0.41
MT-ND3P03897 AC079602.3-201ENST00000623931 403 ntBASIC17.59■□□□□ 0.41
MT-ND3P03897 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-ND3P03897 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
MT-ND3P03897 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-ND3P03897 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-ND3P03897 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-ND3P03897 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
MT-ND3P03897 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-ND3P03897 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MT-ND3P03897 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.59■□□□□ 0.41
MT-ND3P03897 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MT-ND3P03897 AC046185.3-201ENST00000623228 1824 ntBASIC17.58■□□□□ 0.41
MT-ND3P03897 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms