Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ALDH1A1P00352 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ALDH1A1P00352 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ALDH1A1P00352 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ALDH1A1P00352 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ALDH1A1P00352 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.48■□□□□ 0.71
ALDH1A1P00352 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
ALDH1A1P00352 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
ALDH1A1P00352 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.47■□□□□ 0.71
ALDH1A1P00352 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ALDH1A1P00352 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ALDH1A1P00352 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ALDH1A1P00352 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ALDH1A1P00352 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.47■□□□□ 0.71
ALDH1A1P00352 AC142381.1-201ENST00000426099 345 ntBASIC19.47■□□□□ 0.71
ALDH1A1P00352 RN7SL752P-201ENST00000463779 287 ntBASIC19.47■□□□□ 0.71
ALDH1A1P00352 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ALDH1A1P00352 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ALDH1A1P00352 AC104794.3-201ENST00000566840 1248 ntBASIC19.47■□□□□ 0.71
ALDH1A1P00352 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.47■□□□□ 0.71
ALDH1A1P00352 AP3S2-216ENST00000617003 1561 ntBASIC19.47■□□□□ 0.71
ALDH1A1P00352 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.47■□□□□ 0.71
ALDH1A1P00352 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.47■□□□□ 0.71
ALDH1A1P00352 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.47■□□□□ 0.71
ALDH1A1P00352 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ALDH1A1P00352 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.47■□□□□ 0.71
ALDH1A1P00352 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.47■□□□□ 0.71
ALDH1A1P00352 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
ALDH1A1P00352 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.47■□□□□ 0.71
ALDH1A1P00352 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
ALDH1A1P00352 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.47■□□□□ 0.71
ALDH1A1P00352 AC138932.1-201ENST00000534164 6830 ntBASIC19.46■□□□□ 0.71
ALDH1A1P00352 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
ALDH1A1P00352 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ALDH1A1P00352 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
ALDH1A1P00352 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
ALDH1A1P00352 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ALDH1A1P00352 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.46■□□□□ 0.71
ALDH1A1P00352 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ALDH1A1P00352 DFFBP1-201ENST00000433250 979 ntBASIC19.46■□□□□ 0.71
ALDH1A1P00352 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ALDH1A1P00352 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC19.46■□□□□ 0.71
ALDH1A1P00352 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
ALDH1A1P00352 POLE2-203ENST00000553805 496 ntTSL 2 BASIC19.46■□□□□ 0.71
ALDH1A1P00352 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.46■□□□□ 0.71
ALDH1A1P00352 AC009407.1-201ENST00000568958 598 ntBASIC19.46■□□□□ 0.71
ALDH1A1P00352 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.46■□□□□ 0.71
ALDH1A1P00352 NAA38-206ENST00000576384 424 ntTSL 2 BASIC19.46■□□□□ 0.71
ALDH1A1P00352 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.46■□□□□ 0.71
ALDH1A1P00352 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC19.46■□□□□ 0.71
ALDH1A1P00352 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ALDH1A1P00352 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ALDH1A1P00352 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
ALDH1A1P00352 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ALDH1A1P00352 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ALDH1A1P00352 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
ALDH1A1P00352 AC016027.1-202ENST00000607927 1699 ntBASIC19.46■□□□□ 0.71
ALDH1A1P00352 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ALDH1A1P00352 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.7
ALDH1A1P00352 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.45■□□□□ 0.7
ALDH1A1P00352 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.45■□□□□ 0.7
ALDH1A1P00352 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ALDH1A1P00352 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
ALDH1A1P00352 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALDH1A1P00352 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALDH1A1P00352 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ALDH1A1P00352 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALDH1A1P00352 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC19.45■□□□□ 0.7
ALDH1A1P00352 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALDH1A1P00352 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALDH1A1P00352 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALDH1A1P00352 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
ALDH1A1P00352 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ALDH1A1P00352 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALDH1A1P00352 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.45■□□□□ 0.7
ALDH1A1P00352 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALDH1A1P00352 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.45■□□□□ 0.7
ALDH1A1P00352 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC19.45■□□□□ 0.7
ALDH1A1P00352 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.45■□□□□ 0.7
ALDH1A1P00352 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.45■□□□□ 0.7
ALDH1A1P00352 AC008738.7-201ENST00000609744 511 ntBASIC19.45■□□□□ 0.7
ALDH1A1P00352 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALDH1A1P00352 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALDH1A1P00352 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
ALDH1A1P00352 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ALDH1A1P00352 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALDH1A1P00352 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.45■□□□□ 0.7
ALDH1A1P00352 KRT18P55-202ENST00000578578 1546 ntBASIC19.45■□□□□ 0.7
ALDH1A1P00352 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALDH1A1P00352 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALDH1A1P00352 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.45■□□□□ 0.7
ALDH1A1P00352 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.45■□□□□ 0.7
ALDH1A1P00352 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALDH1A1P00352 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ALDH1A1P00352 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALDH1A1P00352 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ALDH1A1P00352 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.44■□□□□ 0.7
ALDH1A1P00352 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ALDH1A1P00352 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.44■□□□□ 0.7
ALDH1A1P00352 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms