Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
OPHN1O60890 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
OPHN1O60890 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
OPHN1O60890 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
OPHN1O60890 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
OPHN1O60890 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
OPHN1O60890 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.03■□□□□ 0.48
OPHN1O60890 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
OPHN1O60890 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
OPHN1O60890 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
OPHN1O60890 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
OPHN1O60890 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
OPHN1O60890 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.03■□□□□ 0.48
OPHN1O60890 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
OPHN1O60890 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
OPHN1O60890 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.03■□□□□ 0.48
OPHN1O60890 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
OPHN1O60890 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
OPHN1O60890 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
OPHN1O60890 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.03■□□□□ 0.48
OPHN1O60890 COX5BP2-201ENST00000392354 334 ntBASIC18.03■□□□□ 0.48
OPHN1O60890 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
OPHN1O60890 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
OPHN1O60890 BX842568.4-201ENST00000421222 227 ntBASIC18.03■□□□□ 0.48
OPHN1O60890 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
OPHN1O60890 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.03■□□□□ 0.48
OPHN1O60890 AC092183.1-201ENST00000469884 875 ntBASIC18.03■□□□□ 0.48
OPHN1O60890 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
OPHN1O60890 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.03■□□□□ 0.48
OPHN1O60890 MIR5100-201ENST00000579544 119 ntBASIC18.03■□□□□ 0.48
OPHN1O60890 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
OPHN1O60890 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
OPHN1O60890 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
OPHN1O60890 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.03■□□□□ 0.48
OPHN1O60890 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
OPHN1O60890 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
OPHN1O60890 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
OPHN1O60890 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
OPHN1O60890 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.02■□□□□ 0.48
OPHN1O60890 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
OPHN1O60890 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
OPHN1O60890 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
OPHN1O60890 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
OPHN1O60890 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.02■□□□□ 0.48
OPHN1O60890 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
OPHN1O60890 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
OPHN1O60890 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
OPHN1O60890 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
OPHN1O60890 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
OPHN1O60890 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
OPHN1O60890 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.02■□□□□ 0.48
OPHN1O60890 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.02■□□□□ 0.48
OPHN1O60890 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.02■□□□□ 0.48
OPHN1O60890 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
OPHN1O60890 AC008608.2-201ENST00000606089 416 ntBASIC18.02■□□□□ 0.48
OPHN1O60890 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.02■□□□□ 0.48
OPHN1O60890 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.02■□□□□ 0.48
OPHN1O60890 AC008894.3-201ENST00000624324 3103 ntBASIC18.02■□□□□ 0.47
OPHN1O60890 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
OPHN1O60890 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
OPHN1O60890 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
OPHN1O60890 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
OPHN1O60890 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
OPHN1O60890 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
OPHN1O60890 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
OPHN1O60890 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
OPHN1O60890 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
OPHN1O60890 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.01■□□□□ 0.47
OPHN1O60890 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.01■□□□□ 0.47
OPHN1O60890 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
OPHN1O60890 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
OPHN1O60890 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
OPHN1O60890 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.01■□□□□ 0.47
OPHN1O60890 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
OPHN1O60890 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
OPHN1O60890 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
OPHN1O60890 AC010460.3-201ENST00000511359 1579 ntBASIC18.01■□□□□ 0.47
OPHN1O60890 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
OPHN1O60890 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
OPHN1O60890 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
OPHN1O60890 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
OPHN1O60890 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
OPHN1O60890 MIR940-201ENST00000401276 94 ntBASIC18.01■□□□□ 0.47
OPHN1O60890 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.01■□□□□ 0.47
OPHN1O60890 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
OPHN1O60890 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.01■□□□□ 0.47
OPHN1O60890 AC002558.1-201ENST00000488906 803 ntBASIC18.01■□□□□ 0.47
OPHN1O60890 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
OPHN1O60890 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.01■□□□□ 0.47
OPHN1O60890 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.01■□□□□ 0.47
OPHN1O60890 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.01■□□□□ 0.47
OPHN1O60890 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.01■□□□□ 0.47
OPHN1O60890 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.01■□□□□ 0.47
OPHN1O60890 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
OPHN1O60890 AC148477.8-201ENST00000624298 468 ntBASIC18.01■□□□□ 0.47
OPHN1O60890 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
OPHN1O60890 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
OPHN1O60890 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
OPHN1O60890 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
OPHN1O60890 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms