Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HCN1O60741 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.17■□□□□ 0.18
HCN1O60741 LINC01451-201ENST00000623792 534 ntBASIC16.17■□□□□ 0.18
HCN1O60741 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HCN1O60741 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCN1O60741 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCN1O60741 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCN1O60741 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCN1O60741 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCN1O60741 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
HCN1O60741 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.17■□□□□ 0.18
HCN1O60741 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCN1O60741 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
HCN1O60741 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HCN1O60741 AC046158.3-201ENST00000624947 2558 ntBASIC16.17■□□□□ 0.18
HCN1O60741 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCN1O60741 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCN1O60741 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.17■□□□□ 0.18
HCN1O60741 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
HCN1O60741 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HCN1O60741 AC022211.2-201ENST00000585075 2527 ntBASIC16.16■□□□□ 0.18
HCN1O60741 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HCN1O60741 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HCN1O60741 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HCN1O60741 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HCN1O60741 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HCN1O60741 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.16■□□□□ 0.18
HCN1O60741 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HCN1O60741 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HCN1O60741 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HCN1O60741 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HCN1O60741 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HCN1O60741 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HCN1O60741 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HCN1O60741 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.16■□□□□ 0.18
HCN1O60741 INTS4P1-201ENST00000438455 1935 ntBASIC16.16■□□□□ 0.18
HCN1O60741 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.16■□□□□ 0.18
HCN1O60741 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HCN1O60741 AC018695.7-201ENST00000624587 2492 ntBASIC16.16■□□□□ 0.18
HCN1O60741 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HCN1O60741 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HCN1O60741 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.16■□□□□ 0.18
HCN1O60741 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HCN1O60741 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.16■□□□□ 0.18
HCN1O60741 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.16■□□□□ 0.18
HCN1O60741 RBM17P3-201ENST00000417687 1192 ntBASIC16.16■□□□□ 0.18
HCN1O60741 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HCN1O60741 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HCN1O60741 DDX43P3-201ENST00000441064 443 ntBASIC16.16■□□□□ 0.18
HCN1O60741 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.16■□□□□ 0.18
HCN1O60741 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.16■□□□□ 0.18
HCN1O60741 AF238378.1-201ENST00000526806 358 ntBASIC16.16■□□□□ 0.18
HCN1O60741 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HCN1O60741 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
HCN1O60741 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.16■□□□□ 0.18
HCN1O60741 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.16■□□□□ 0.18
HCN1O60741 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.16■□□□□ 0.18
HCN1O60741 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.16■□□□□ 0.18
HCN1O60741 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
HCN1O60741 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HCN1O60741 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HCN1O60741 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HCN1O60741 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.16■□□□□ 0.18
HCN1O60741 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HCN1O60741 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HCN1O60741 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HCN1O60741 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.16■□□□□ 0.18
HCN1O60741 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.16■□□□□ 0.18
HCN1O60741 AC097374.2-201ENST00000618617 1306 ntBASIC16.16■□□□□ 0.18
HCN1O60741 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.16■□□□□ 0.18
HCN1O60741 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HCN1O60741 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HCN1O60741 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HCN1O60741 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HCN1O60741 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.15■□□□□ 0.18
HCN1O60741 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.15■□□□□ 0.18
HCN1O60741 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HCN1O60741 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HCN1O60741 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HCN1O60741 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HCN1O60741 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HCN1O60741 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.15■□□□□ 0.18
HCN1O60741 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HCN1O60741 AC009949.1-201ENST00000623048 1830 ntBASIC16.15■□□□□ 0.18
HCN1O60741 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HCN1O60741 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HCN1O60741 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HCN1O60741 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HCN1O60741 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.15■□□□□ 0.18
HCN1O60741 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.15■□□□□ 0.18
HCN1O60741 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HCN1O60741 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.15■□□□□ 0.18
HCN1O60741 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HCN1O60741 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.15■□□□□ 0.18
HCN1O60741 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HCN1O60741 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.15■□□□□ 0.18
HCN1O60741 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.15■□□□□ 0.18
HCN1O60741 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.15■□□□□ 0.18
HCN1O60741 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HCN1O60741 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms