Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 AC148477.8-201ENST00000624298 468 ntBASIC21.27■■□□□ 1
SMARCA5O60264 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SMARCA5O60264 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
SMARCA5O60264 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC21.27■■□□□ 1
SMARCA5O60264 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SMARCA5O60264 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SMARCA5O60264 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SMARCA5O60264 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SMARCA5O60264 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC21.27■□□□□ 0.99
SMARCA5O60264 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.27■□□□□ 0.99
SMARCA5O60264 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC21.26■□□□□ 0.99
SMARCA5O60264 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
SMARCA5O60264 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCA5O60264 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCA5O60264 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SMARCA5O60264 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SMARCA5O60264 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCA5O60264 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCA5O60264 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC21.26■□□□□ 0.99
SMARCA5O60264 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCA5O60264 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCA5O60264 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
SMARCA5O60264 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SMARCA5O60264 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCA5O60264 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SMARCA5O60264 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.26■□□□□ 0.99
SMARCA5O60264 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21.26■□□□□ 0.99
SMARCA5O60264 AL031008.1-201ENST00000619963 541 ntBASIC21.26■□□□□ 0.99
SMARCA5O60264 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCA5O60264 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCA5O60264 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCA5O60264 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
SMARCA5O60264 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCA5O60264 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCA5O60264 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCA5O60264 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCA5O60264 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCA5O60264 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCA5O60264 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SMARCA5O60264 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SMARCA5O60264 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SMARCA5O60264 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SMARCA5O60264 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMARCA5O60264 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SMARCA5O60264 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
SMARCA5O60264 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMARCA5O60264 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC21.25■□□□□ 0.99
SMARCA5O60264 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
SMARCA5O60264 FRMD8P1-201ENST00000440433 1524 ntBASIC21.25■□□□□ 0.99
SMARCA5O60264 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SMARCA5O60264 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
SMARCA5O60264 NKILA-202ENST00000614771 2598 ntBASIC21.25■□□□□ 0.99
SMARCA5O60264 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SMARCA5O60264 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC21.25■□□□□ 0.99
SMARCA5O60264 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SMARCA5O60264 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
SMARCA5O60264 RPS2P1-201ENST00000434010 821 ntBASIC21.25■□□□□ 0.99
SMARCA5O60264 HNRNPDP1-201ENST00000439535 754 ntBASIC21.25■□□□□ 0.99
SMARCA5O60264 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.25■□□□□ 0.99
SMARCA5O60264 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC21.25■□□□□ 0.99
SMARCA5O60264 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC21.25■□□□□ 0.99
SMARCA5O60264 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.25■□□□□ 0.99
SMARCA5O60264 AL353135.1-201ENST00000606729 504 ntBASIC21.25■□□□□ 0.99
SMARCA5O60264 AC011676.5-201ENST00000624864 2660 ntBASIC21.25■□□□□ 0.99
SMARCA5O60264 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SMARCA5O60264 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SMARCA5O60264 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC21.25■□□□□ 0.99
SMARCA5O60264 AL590787.1-201ENST00000568856 1315 ntBASIC21.25■□□□□ 0.99
SMARCA5O60264 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMARCA5O60264 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC21.24■□□□□ 0.99
SMARCA5O60264 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SMARCA5O60264 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
SMARCA5O60264 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC21.24■□□□□ 0.99
SMARCA5O60264 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMARCA5O60264 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SMARCA5O60264 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC21.24■□□□□ 0.99
SMARCA5O60264 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SMARCA5O60264 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SMARCA5O60264 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SMARCA5O60264 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC21.24■□□□□ 0.99
SMARCA5O60264 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC21.24■□□□□ 0.99
SMARCA5O60264 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.24■□□□□ 0.99
SMARCA5O60264 COX5A-202ENST00000562233 441 ntTSL 3 BASIC21.24■□□□□ 0.99
SMARCA5O60264 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMARCA5O60264 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SMARCA5O60264 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMARCA5O60264 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC21.24■□□□□ 0.99
SMARCA5O60264 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMARCA5O60264 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC21.24■□□□□ 0.99
SMARCA5O60264 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCA5O60264 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCA5O60264 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC21.23■□□□□ 0.99
SMARCA5O60264 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCA5O60264 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SMARCA5O60264 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCA5O60264 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCA5O60264 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCA5O60264 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SMARCA5O60264 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCA5O60264 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms