Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.42■□□□□ 0.54
TNRC18O15417 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.42■□□□□ 0.54
TNRC18O15417 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TNRC18O15417 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TNRC18O15417 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TNRC18O15417 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TNRC18O15417 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.42■□□□□ 0.54
TNRC18O15417 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNRC18O15417 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.42■□□□□ 0.54
TNRC18O15417 AP000812.2-201ENST00000538934 718 ntBASIC18.42■□□□□ 0.54
TNRC18O15417 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC18.42■□□□□ 0.54
TNRC18O15417 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.42■□□□□ 0.54
TNRC18O15417 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.42■□□□□ 0.54
TNRC18O15417 AP003419.4-201ENST00000616071 517 ntBASIC18.42■□□□□ 0.54
TNRC18O15417 AC138627.1-207ENST00000641560 1006 ntBASIC18.42■□□□□ 0.54
TNRC18O15417 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.42■□□□□ 0.54
TNRC18O15417 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNRC18O15417 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TNRC18O15417 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TNRC18O15417 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TNRC18O15417 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNRC18O15417 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TNRC18O15417 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNRC18O15417 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNRC18O15417 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.42■□□□□ 0.54
TNRC18O15417 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
TNRC18O15417 AL512361.1-201ENST00000554200 418 ntBASIC18.42■□□□□ 0.54
TNRC18O15417 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC18.42■□□□□ 0.54
TNRC18O15417 AC018635.2-201ENST00000608625 364 ntBASIC18.42■□□□□ 0.54
TNRC18O15417 AC097724.1-201ENST00000609581 426 ntBASIC18.42■□□□□ 0.54
TNRC18O15417 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TNRC18O15417 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNRC18O15417 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNRC18O15417 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.41■□□□□ 0.54
TNRC18O15417 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.41■□□□□ 0.54
TNRC18O15417 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNRC18O15417 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TNRC18O15417 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNRC18O15417 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNRC18O15417 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNRC18O15417 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.41■□□□□ 0.54
TNRC18O15417 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNRC18O15417 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNRC18O15417 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TNRC18O15417 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TNRC18O15417 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TNRC18O15417 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.41■□□□□ 0.54
TNRC18O15417 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TNRC18O15417 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNRC18O15417 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC18.41■□□□□ 0.54
TNRC18O15417 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.41■□□□□ 0.54
TNRC18O15417 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC18.41■□□□□ 0.54
TNRC18O15417 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TNRC18O15417 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.41■□□□□ 0.54
TNRC18O15417 GMCL1P1-201ENST00000463439 1581 ntBASIC18.41■□□□□ 0.54
TNRC18O15417 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.4■□□□□ 0.54
TNRC18O15417 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TNRC18O15417 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC18.4■□□□□ 0.54
TNRC18O15417 MIR5189-201ENST00000577370 114 ntBASIC18.4■□□□□ 0.54
TNRC18O15417 ABBA01031663.1-201ENST00000635630 790 ntBASIC18.4■□□□□ 0.54
TNRC18O15417 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNRC18O15417 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TNRC18O15417 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.4■□□□□ 0.54
TNRC18O15417 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNRC18O15417 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNRC18O15417 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TNRC18O15417 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNRC18O15417 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TNRC18O15417 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
TNRC18O15417 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.4■□□□□ 0.54
TNRC18O15417 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNRC18O15417 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TNRC18O15417 RPL13AP19-201ENST00000434320 584 ntBASIC18.4■□□□□ 0.54
TNRC18O15417 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.4■□□□□ 0.54
TNRC18O15417 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
TNRC18O15417 AC005412.3-201ENST00000580309 715 ntBASIC18.4■□□□□ 0.54
TNRC18O15417 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC18.4■□□□□ 0.54
TNRC18O15417 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TNRC18O15417 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.4■□□□□ 0.54
TNRC18O15417 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.4■□□□□ 0.54
TNRC18O15417 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TNRC18O15417 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.4■□□□□ 0.54
TNRC18O15417 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TNRC18O15417 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TNRC18O15417 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
TNRC18O15417 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TNRC18O15417 FTLP1-201ENST00000449155 526 ntBASIC18.39■□□□□ 0.54
TNRC18O15417 AC105021.1-202ENST00000570572 669 ntBASIC18.39■□□□□ 0.54
TNRC18O15417 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.39■□□□□ 0.54
TNRC18O15417 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
TNRC18O15417 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC18.39■□□□□ 0.54
TNRC18O15417 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
TNRC18O15417 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.39■□□□□ 0.54
TNRC18O15417 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.39■□□□□ 0.54
TNRC18O15417 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNRC18O15417 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNRC18O15417 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNRC18O15417 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TNRC18O15417 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNRC18O15417 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms