Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 NKAPP1-205ENST00000585790 367 ntBASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 AC093525.9-201ENST00000624961 1746 ntBASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 AC132938.5-201ENST00000624980 1813 ntBASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPDC1A2A3K4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPDC1A2A3K4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPDC1A2A3K4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PTPDC1A2A3K4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.29■□□□□ 0.84
PTPDC1A2A3K4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.29■□□□□ 0.84
PTPDC1A2A3K4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PTPDC1A2A3K4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPDC1A2A3K4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PTPDC1A2A3K4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.29■□□□□ 0.84
PTPDC1A2A3K4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPDC1A2A3K4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.29■□□□□ 0.84
PTPDC1A2A3K4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.29■□□□□ 0.84
PTPDC1A2A3K4 AL671883.3-201ENST00000603274 991 ntBASIC20.29■□□□□ 0.84
PTPDC1A2A3K4 AC116407.3-201ENST00000623905 1129 ntBASIC20.29■□□□□ 0.84
PTPDC1A2A3K4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPDC1A2A3K4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.29■□□□□ 0.84
PTPDC1A2A3K4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPDC1A2A3K4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPDC1A2A3K4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPDC1A2A3K4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPDC1A2A3K4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PTPDC1A2A3K4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.29■□□□□ 0.84
PTPDC1A2A3K4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PTPDC1A2A3K4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPDC1A2A3K4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PTPDC1A2A3K4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PTPDC1A2A3K4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPDC1A2A3K4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PTPDC1A2A3K4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PTPDC1A2A3K4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTPDC1A2A3K4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PTPDC1A2A3K4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPDC1A2A3K4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPDC1A2A3K4 AL121761.2-201ENST00000598007 1648 ntBASIC20.28■□□□□ 0.84
PTPDC1A2A3K4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPDC1A2A3K4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPDC1A2A3K4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PTPDC1A2A3K4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PTPDC1A2A3K4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.28■□□□□ 0.84
PTPDC1A2A3K4 OR7E14P-202ENST00000530490 1290 ntBASIC20.28■□□□□ 0.84
PTPDC1A2A3K4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.28■□□□□ 0.84
PTPDC1A2A3K4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.28■□□□□ 0.84
PTPDC1A2A3K4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.28■□□□□ 0.84
PTPDC1A2A3K4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.28■□□□□ 0.84
PTPDC1A2A3K4 AC025062.2-201ENST00000605477 670 ntBASIC20.28■□□□□ 0.84
PTPDC1A2A3K4 AD001527.2-201ENST00000622994 785 ntBASIC20.28■□□□□ 0.84
PTPDC1A2A3K4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.28■□□□□ 0.84
PTPDC1A2A3K4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPDC1A2A3K4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
PTPDC1A2A3K4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPDC1A2A3K4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPDC1A2A3K4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.27■□□□□ 0.84
PTPDC1A2A3K4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPDC1A2A3K4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
PTPDC1A2A3K4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PTPDC1A2A3K4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTPDC1A2A3K4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPDC1A2A3K4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PTPDC1A2A3K4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPDC1A2A3K4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPDC1A2A3K4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPDC1A2A3K4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPDC1A2A3K4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPDC1A2A3K4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPDC1A2A3K4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTPDC1A2A3K4 AC009336.1-201ENST00000608941 1553 ntBASIC20.27■□□□□ 0.84
PTPDC1A2A3K4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTPDC1A2A3K4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPDC1A2A3K4 MIR574-201ENST00000385209 96 ntBASIC20.27■□□□□ 0.84
PTPDC1A2A3K4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PTPDC1A2A3K4 BX005266.1-201ENST00000473402 457 ntBASIC20.27■□□□□ 0.84
PTPDC1A2A3K4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.27■□□□□ 0.84
PTPDC1A2A3K4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPDC1A2A3K4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTPDC1A2A3K4 MTDHP4-201ENST00000600287 670 ntBASIC20.27■□□□□ 0.84
PTPDC1A2A3K4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPDC1A2A3K4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.27■□□□□ 0.84
PTPDC1A2A3K4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPDC1A2A3K4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTPDC1A2A3K4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms