Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 AC068587.6-202ENST00000641839 5619 ntBASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 HBZP1-201ENST00000354915 429 ntBASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 MIR662-201ENST00000384847 95 ntBASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 AC092647.4-201ENST00000457211 535 ntBASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 GPR32P1-201ENST00000601788 811 ntBASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 AC006011.2-201ENST00000621313 1158 ntBASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF103-CHMP3A0A140T963 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 AK4P3-201ENST00000418260 669 ntBASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 AC112907.2-201ENST00000448639 330 ntBASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 VENTXP5-201ENST00000523979 775 ntBASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF103-CHMP3A0A140T963 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms