Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 NME3-204ENST00000563498 920 ntTSL 2 BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 CLN6-204ENST00000564752 900 ntTSL 3 BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 AC116407.2-201ENST00000613639 860 ntBASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 AC009154.2-201ENST00000621177 724 ntBASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 CLN6-214ENST00000636314 442 ntTSL 3 BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 CES3-203ENST00000543856 3178 ntTSL 2 BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 HYMAI-201ENST00000635591 3347 ntBASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 AL353692.3-201ENST00000407031 1396 ntBASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 AC007950.2-201ENST00000615045 2347 ntBASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 AC005332.3-201ENST00000589904 676 ntBASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 ANKRD20A8P-203ENST00000641373 517 ntBASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HHLA3Q9XRX5 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 BAALC-202ENST00000306391 243 ntTSL 5 BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 BAALC-204ENST00000330955 222 ntTSL 5 BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 GUK1-204ENST00000366721 689 ntTSL 3 BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 AL645929.1-201ENST00000420084 975 ntBASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HHLA3Q9XRX5 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms