Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC26.94■■□□□ 1.9
RIMBP3Q9UFD9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC26.94■■□□□ 1.9
RIMBP3Q9UFD9 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC26.94■■□□□ 1.9
RIMBP3Q9UFD9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC26.94■■□□□ 1.9
RIMBP3Q9UFD9 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
RIMBP3Q9UFD9 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
RIMBP3Q9UFD9 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC26.94■■□□□ 1.9
RIMBP3Q9UFD9 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
RIMBP3Q9UFD9 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC26.94■■□□□ 1.9
RIMBP3Q9UFD9 APRT-204ENST00000563655 709 ntTSL 5 BASIC26.94■■□□□ 1.9
RIMBP3Q9UFD9 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC26.94■■□□□ 1.9
RIMBP3Q9UFD9 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RIMBP3Q9UFD9 PAM16-204ENST00000571941 674 ntTSL 3 BASIC26.94■■□□□ 1.9
RIMBP3Q9UFD9 PIGL-212ENST00000581006 554 ntTSL 4 BASIC26.94■■□□□ 1.9
RIMBP3Q9UFD9 USP39-202ENST00000409025 1946 ntTSL 5 BASIC26.94■■□□□ 1.9
RIMBP3Q9UFD9 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RIMBP3Q9UFD9 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC26.93■■□□□ 1.9
RIMBP3Q9UFD9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC26.93■■□□□ 1.9
RIMBP3Q9UFD9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RIMBP3Q9UFD9 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
RIMBP3Q9UFD9 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
RIMBP3Q9UFD9 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC26.93■■□□□ 1.9
RIMBP3Q9UFD9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC26.93■■□□□ 1.9
RIMBP3Q9UFD9 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RIMBP3Q9UFD9 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
RIMBP3Q9UFD9 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RIMBP3Q9UFD9 MEP1AP4-201ENST00000423244 1087 ntBASIC26.93■■□□□ 1.9
RIMBP3Q9UFD9 TMEM198B-204ENST00000484016 896 ntBASIC26.93■■□□□ 1.9
RIMBP3Q9UFD9 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC26.93■■□□□ 1.9
RIMBP3Q9UFD9 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC26.93■■□□□ 1.9
RIMBP3Q9UFD9 RRP7BP-205ENST00000566851 833 ntBASIC26.93■■□□□ 1.9
RIMBP3Q9UFD9 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC26.93■■□□□ 1.9
RIMBP3Q9UFD9 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RIMBP3Q9UFD9 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC26.93■■□□□ 1.9
RIMBP3Q9UFD9 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC26.93■■□□□ 1.9
RIMBP3Q9UFD9 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC26.93■■□□□ 1.9
RIMBP3Q9UFD9 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC26.93■■□□□ 1.9
RIMBP3Q9UFD9 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC26.93■■□□□ 1.9
RIMBP3Q9UFD9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC26.93■■□□□ 1.9
RIMBP3Q9UFD9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
RIMBP3Q9UFD9 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
RIMBP3Q9UFD9 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC26.92■■□□□ 1.9
RIMBP3Q9UFD9 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC26.92■■□□□ 1.9
RIMBP3Q9UFD9 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RIMBP3Q9UFD9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RIMBP3Q9UFD9 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
RIMBP3Q9UFD9 MPV17-206ENST00000402722 827 ntTSL 3 BASIC26.92■■□□□ 1.9
RIMBP3Q9UFD9 AL355334.1-201ENST00000417713 215 ntBASIC26.92■■□□□ 1.9
RIMBP3Q9UFD9 RPL13AP20-201ENST00000459725 609 ntBASIC26.92■■□□□ 1.9
RIMBP3Q9UFD9 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC26.92■■□□□ 1.9
RIMBP3Q9UFD9 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RIMBP3Q9UFD9 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC26.92■■□□□ 1.9
RIMBP3Q9UFD9 ABBA01031663.1-201ENST00000635630 790 ntBASIC26.92■■□□□ 1.9
RIMBP3Q9UFD9 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RIMBP3Q9UFD9 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC26.92■■□□□ 1.9
RIMBP3Q9UFD9 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
RIMBP3Q9UFD9 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RIMBP3Q9UFD9 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RIMBP3Q9UFD9 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RIMBP3Q9UFD9 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RIMBP3Q9UFD9 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RIMBP3Q9UFD9 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RIMBP3Q9UFD9 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
RIMBP3Q9UFD9 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RIMBP3Q9UFD9 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RIMBP3Q9UFD9 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RIMBP3Q9UFD9 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RIMBP3Q9UFD9 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RIMBP3Q9UFD9 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC26.91■■□□□ 1.9
RIMBP3Q9UFD9 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC26.91■■□□□ 1.9
RIMBP3Q9UFD9 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC26.91■■□□□ 1.9
RIMBP3Q9UFD9 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RIMBP3Q9UFD9 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RIMBP3Q9UFD9 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC26.91■■□□□ 1.9
RIMBP3Q9UFD9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC26.91■■□□□ 1.9
RIMBP3Q9UFD9 SLC22A20-204ENST00000530038 1673 ntBASIC26.91■■□□□ 1.9
RIMBP3Q9UFD9 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
RIMBP3Q9UFD9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC26.91■■□□□ 1.9
RIMBP3Q9UFD9 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RIMBP3Q9UFD9 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC26.9■■□□□ 1.9
RIMBP3Q9UFD9 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC26.9■■□□□ 1.9
RIMBP3Q9UFD9 RPL7P3-201ENST00000441388 714 ntBASIC26.9■■□□□ 1.9
RIMBP3Q9UFD9 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC26.9■■□□□ 1.9
RIMBP3Q9UFD9 AC046185.3-201ENST00000623228 1824 ntBASIC26.9■■□□□ 1.9
RIMBP3Q9UFD9 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC26.9■■□□□ 1.9
RIMBP3Q9UFD9 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC26.9■■□□□ 1.9
RIMBP3Q9UFD9 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RIMBP3Q9UFD9 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RIMBP3Q9UFD9 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RIMBP3Q9UFD9 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RIMBP3Q9UFD9 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
RIMBP3Q9UFD9 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
RIMBP3Q9UFD9 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC26.9■■□□□ 1.9
RIMBP3Q9UFD9 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RIMBP3Q9UFD9 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC26.9■■□□□ 1.9
RIMBP3Q9UFD9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RIMBP3Q9UFD9 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC26.9■■□□□ 1.9
RIMBP3Q9UFD9 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RIMBP3Q9UFD9 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RIMBP3Q9UFD9 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms