Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCKIPSDQ9NZQ3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.51■□□□□ 0.39
NCKIPSDQ9NZQ3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 AL121761.2-201ENST00000598007 1648 ntBASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 AC022211.2-201ENST00000585075 2527 ntBASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 MIR574-201ENST00000385209 96 ntBASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NCKIPSDQ9NZQ3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 REXO1L11P-201ENST00000620964 1927 ntBASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 DDX43P3-201ENST00000441064 443 ntBASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 ZNF259P1-201ENST00000407656 1365 ntBASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.49■□□□□ 0.39
NCKIPSDQ9NZQ3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCKIPSDQ9NZQ3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCKIPSDQ9NZQ3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCKIPSDQ9NZQ3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCKIPSDQ9NZQ3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
NCKIPSDQ9NZQ3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCKIPSDQ9NZQ3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.48■□□□□ 0.39
NCKIPSDQ9NZQ3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NCKIPSDQ9NZQ3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NCKIPSDQ9NZQ3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NCKIPSDQ9NZQ3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
NCKIPSDQ9NZQ3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.48■□□□□ 0.39
NCKIPSDQ9NZQ3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCKIPSDQ9NZQ3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCKIPSDQ9NZQ3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.48■□□□□ 0.39
NCKIPSDQ9NZQ3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
NCKIPSDQ9NZQ3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCKIPSDQ9NZQ3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.48■□□□□ 0.39
NCKIPSDQ9NZQ3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
NCKIPSDQ9NZQ3 KRT18P13-201ENST00000400056 1290 ntBASIC17.48■□□□□ 0.39
NCKIPSDQ9NZQ3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.48■□□□□ 0.39
NCKIPSDQ9NZQ3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms